RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
SPPL3-209ENST00000545209 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
SPPL3-209ENST00000545209 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SPPL3-209ENST00000545209 TNP1P09430 55 aa2.97□□□□□ -1.93
SPPL3-209ENST00000545209 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
SPPL3-209ENST00000545209 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
SPPL3-209ENST00000545209 MT1BP07438 61 aa2.94□□□□□ -1.94
SPPL3-209ENST00000545209 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
SPPL3-209ENST00000545209 MT1XP80297 61 aa2.87□□□□□ -1.95
SPPL3-209ENST00000545209 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SPPL3-209ENST00000545209 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
SPPL3-209ENST00000545209 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SPPL3-209ENST00000545209 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
SPPL3-209ENST00000545209 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
SPPL3-209ENST00000545209 USH2AO75445 5202 aa2.73□□□□□ -1.97
SPPL3-209ENST00000545209 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
SPPL3-209ENST00000545209 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
SPPL3-209ENST00000545209 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
SPPL3-209ENST00000545209 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
SPPL3-209ENST00000545209 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
SPPL3-209ENST00000545209 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
SPPL3-209ENST00000545209 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
SPPL3-209ENST00000545209 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
SPPL3-209ENST00000545209 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
SPPL3-209ENST00000545209 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
SPPL3-209ENST00000545209 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
SPPL3-209ENST00000545209 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
SPPL3-209ENST00000545209 MT1EP04732 61 aa2.52□□□□□ -2.01
SPPL3-209ENST00000545209 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
SPPL3-209ENST00000545209 MT1LQ93083 61 aa2.49□□□□□ -2.01
SPPL3-209ENST00000545209 KMT2DO14686 5537 aa2.47□□□□□ -2.01
SPPL3-209ENST00000545209 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
SPPL3-209ENST00000545209 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
SPPL3-209ENST00000545209 MT1GP13640 62 aa2.41□□□□□ -2.02
SPPL3-209ENST00000545209 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
SPPL3-209ENST00000545209 MT1MQ8N339 61 aa2.37□□□□□ -2.03
SPPL3-209ENST00000545209 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
SPPL3-209ENST00000545209 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.03
SPPL3-209ENST00000545209 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
SPPL3-209ENST00000545209 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
SPPL3-209ENST00000545209 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SPPL3-209ENST00000545209 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
SPPL3-209ENST00000545209 SPRR2EP22531 72 aa2.29□□□□□ -2.04
SPPL3-209ENST00000545209 SPRR2BP35325 72 aa2.29□□□□□ -2.04
SPPL3-209ENST00000545209 SPRR2AP35326 72 aa2.29□□□□□ -2.04
SPPL3-209ENST00000545209 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
SPPL3-209ENST00000545209 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
SPPL3-209ENST00000545209 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
SPPL3-209ENST00000545209 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
SPPL3-209ENST00000545209 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
SPPL3-209ENST00000545209 NEBP20929 6669 aa2.21□□□□□ -2.06
SPPL3-209ENST00000545209 SPRR2DP22532 72 aa2.21□□□□□ -2.06
SPPL3-209ENST00000545209 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
SPPL3-209ENST00000545209 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
SPPL3-209ENST00000545209 INE1O15225 51 aa2.15□□□□□ -2.07
SPPL3-209ENST00000545209 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
SPPL3-209ENST00000545209 MT1AP04731 61 aa2.12□□□□□ -2.07
SPPL3-209ENST00000545209 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
SPPL3-209ENST00000545209 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
SPPL3-209ENST00000545209 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
SPPL3-209ENST00000545209 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
SPPL3-209ENST00000545209 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
SPPL3-209ENST00000545209 MT4P47944 62 aa1.9□□□□□ -2.11
SPPL3-209ENST00000545209 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
SPPL3-209ENST00000545209 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SPPL3-209ENST00000545209 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
SPPL3-209ENST00000545209 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SPPL3-209ENST00000545209 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SPPL3-209ENST00000545209 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
SPPL3-209ENST00000545209 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
SPPL3-209ENST00000545209 PRM1P04553 51 aa1.66□□□□□ -2.14
SPPL3-209ENST00000545209 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SPPL3-209ENST00000545209 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
SPPL3-209ENST00000545209 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
SPPL3-209ENST00000545209 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
SPPL3-209ENST00000545209 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
SPPL3-209ENST00000545209 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SPPL3-209ENST00000545209 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms