RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 UQCR11O14957 56 aa4.68□□□□□ -1.66
CIT-214ENST00000544588 MT1LQ93083 61 aa4.67□□□□□ -1.66
CIT-214ENST00000544588 MT1MQ8N339 61 aa4.66□□□□□ -1.66
CIT-214ENST00000544588 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
CIT-214ENST00000544588 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
CIT-214ENST00000544588 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
CIT-214ENST00000544588 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
CIT-214ENST00000544588 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
CIT-214ENST00000544588 K7ERS5 55 aa4.54□□□□□ -1.68
CIT-214ENST00000544588 MT4P47944 62 aa4.53□□□□□ -1.68
CIT-214ENST00000544588 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
CIT-214ENST00000544588 PSPHP1O15172 72 aa4.51□□□□□ -1.69
CIT-214ENST00000544588 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
CIT-214ENST00000544588 V9GYY9 64 aa4.49□□□□□ -1.69
CIT-214ENST00000544588 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CIT-214ENST00000544588 Q1T7F1 81 aa4.47□□□□□ -1.69
CIT-214ENST00000544588 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CIT-214ENST00000544588 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
CIT-214ENST00000544588 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CIT-214ENST00000544588 A6NED7 52 aa4.36□□□□□ -1.71
CIT-214ENST00000544588 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
CIT-214ENST00000544588 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
CIT-214ENST00000544588 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
CIT-214ENST00000544588 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
CIT-214ENST00000544588 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CIT-214ENST00000544588 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
CIT-214ENST00000544588 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CIT-214ENST00000544588 PCP4P48539 62 aa4.23□□□□□ -1.73
CIT-214ENST00000544588 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
CIT-214ENST00000544588 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
CIT-214ENST00000544588 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
CIT-214ENST00000544588 ROMO1P60602 79 aa4.19□□□□□ -1.74
CIT-214ENST00000544588 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
CIT-214ENST00000544588 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
CIT-214ENST00000544588 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
CIT-214ENST00000544588 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
CIT-214ENST00000544588 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
CIT-214ENST00000544588 H3BS24 57 aa4.04□□□□□ -1.76
CIT-214ENST00000544588 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
CIT-214ENST00000544588 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
CIT-214ENST00000544588 MT1AP04731 61 aa3.97□□□□□ -1.77
CIT-214ENST00000544588 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
CIT-214ENST00000544588 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
CIT-214ENST00000544588 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
CIT-214ENST00000544588 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
CIT-214ENST00000544588 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
CIT-214ENST00000544588 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
CIT-214ENST00000544588 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
CIT-214ENST00000544588 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
CIT-214ENST00000544588 MT3P25713 68 aa3.67□□□□□ -1.82
CIT-214ENST00000544588 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
CIT-214ENST00000544588 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
CIT-214ENST00000544588 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
CIT-214ENST00000544588 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
CIT-214ENST00000544588 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
CIT-214ENST00000544588 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CIT-214ENST00000544588 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
CIT-214ENST00000544588 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CIT-214ENST00000544588 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CIT-214ENST00000544588 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
CIT-214ENST00000544588 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CIT-214ENST00000544588 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
CIT-214ENST00000544588 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CIT-214ENST00000544588 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CIT-214ENST00000544588 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
CIT-214ENST00000544588 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
CIT-214ENST00000544588 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
CIT-214ENST00000544588 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
CIT-214ENST00000544588 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
CIT-214ENST00000544588 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CIT-214ENST00000544588 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CIT-214ENST00000544588 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
CIT-214ENST00000544588 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
CIT-214ENST00000544588 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
CIT-214ENST00000544588 PRM1P04553 51 aa2.15□□□□□ -2.07
CIT-214ENST00000544588 INE1O15225 51 aa2.14□□□□□ -2.07
CIT-214ENST00000544588 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
CIT-214ENST00000544588 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms