RNA–Protein interactions for RNA: ENST00000544365.5

ECHDC2-225, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 5

Gene ECHDC2, Length 1,335 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-225ENST00000544365 K7ERS5 55 aa7.44□□□□□ -1.22
ECHDC2-225ENST00000544365 A6NED7 52 aa7.34□□□□□ -1.23
ECHDC2-225ENST00000544365 MT1GP13640 62 aa7.34□□□□□ -1.23
ECHDC2-225ENST00000544365 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
ECHDC2-225ENST00000544365 MT1LQ93083 61 aa7.28□□□□□ -1.24
ECHDC2-225ENST00000544365 PP632Q6XCG6 107 aa7.27□□□□□ -1.24
ECHDC2-225ENST00000544365 DSTQ03001 7570 aaKnown RBP7.2□□□□□ -1.26
ECHDC2-225ENST00000544365 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
ECHDC2-225ENST00000544365 MT1MQ8N339 61 aa7.19□□□□□ -1.26
ECHDC2-225ENST00000544365 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
ECHDC2-225ENST00000544365 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
ECHDC2-225ENST00000544365 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
ECHDC2-225ENST00000544365 ROMO1P60602 79 aa6.97□□□□□ -1.29
ECHDC2-225ENST00000544365 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
ECHDC2-225ENST00000544365 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
ECHDC2-225ENST00000544365 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
ECHDC2-225ENST00000544365 KRTAP19-4Q3LI73 84 aa6.85□□□□□ -1.31
ECHDC2-225ENST00000544365 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
ECHDC2-225ENST00000544365 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
ECHDC2-225ENST00000544365 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
ECHDC2-225ENST00000544365 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
ECHDC2-225ENST00000544365 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
ECHDC2-225ENST00000544365 MT4P47944 62 aa6.68□□□□□ -1.34
ECHDC2-225ENST00000544365 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
ECHDC2-225ENST00000544365 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
ECHDC2-225ENST00000544365 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
ECHDC2-225ENST00000544365 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
ECHDC2-225ENST00000544365 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
ECHDC2-225ENST00000544365 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
ECHDC2-225ENST00000544365 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
ECHDC2-225ENST00000544365 KRTAP20-2Q3LI61 65 aa6.32□□□□□ -1.4
ECHDC2-225ENST00000544365 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
ECHDC2-225ENST00000544365 H3BS24 57 aa6.24□□□□□ -1.41
ECHDC2-225ENST00000544365 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
ECHDC2-225ENST00000544365 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.41
ECHDC2-225ENST00000544365 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.41
ECHDC2-225ENST00000544365 MT1AP04731 61 aa6.2□□□□□ -1.42
ECHDC2-225ENST00000544365 PMAIP1Q13794 54 aa6.17□□□□□ -1.42
ECHDC2-225ENST00000544365 KRTAP6-1Q3LI64 71 aa6.14□□□□□ -1.43
ECHDC2-225ENST00000544365 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
ECHDC2-225ENST00000544365 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
ECHDC2-225ENST00000544365 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
ECHDC2-225ENST00000544365 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
ECHDC2-225ENST00000544365 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
ECHDC2-225ENST00000544365 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
ECHDC2-225ENST00000544365 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
ECHDC2-225ENST00000544365 PRAC1Q96KF2 57 aa5.87□□□□□ -1.47
ECHDC2-225ENST00000544365 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
ECHDC2-225ENST00000544365 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
ECHDC2-225ENST00000544365 MT3P25713 68 aa5.68□□□□□ -1.5
ECHDC2-225ENST00000544365 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
ECHDC2-225ENST00000544365 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
ECHDC2-225ENST00000544365 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
ECHDC2-225ENST00000544365 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
ECHDC2-225ENST00000544365 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
ECHDC2-225ENST00000544365 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
ECHDC2-225ENST00000544365 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
ECHDC2-225ENST00000544365 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
ECHDC2-225ENST00000544365 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
ECHDC2-225ENST00000544365 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
ECHDC2-225ENST00000544365 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
ECHDC2-225ENST00000544365 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
ECHDC2-225ENST00000544365 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
ECHDC2-225ENST00000544365 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
ECHDC2-225ENST00000544365 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
ECHDC2-225ENST00000544365 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
ECHDC2-225ENST00000544365 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
ECHDC2-225ENST00000544365 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
ECHDC2-225ENST00000544365 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
ECHDC2-225ENST00000544365 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
ECHDC2-225ENST00000544365 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
ECHDC2-225ENST00000544365 PHGR1C9JFL3 82 aa3.71□□□□□ -1.81
ECHDC2-225ENST00000544365 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
ECHDC2-225ENST00000544365 PRM1P04553 51 aa3.56□□□□□ -1.84
ECHDC2-225ENST00000544365 INE1O15225 51 aa3.38□□□□□ -1.87
ECHDC2-225ENST00000544365 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
ECHDC2-225ENST00000544365 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
ECHDC2-225ENST00000544365 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms