RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MT1LQ93083 61 aa8.28□□□□□ -1.08
CHFR-222ENST00000544093 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
CHFR-222ENST00000544093 MT1MQ8N339 61 aa8.23□□□□□ -1.09
CHFR-222ENST00000544093 V9GYY9 64 aa8.23□□□□□ -1.09
CHFR-222ENST00000544093 K7ERS5 55 aa8.17□□□□□ -1.1
CHFR-222ENST00000544093 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
CHFR-222ENST00000544093 Q1T7F1 81 aa8.11□□□□□ -1.11
CHFR-222ENST00000544093 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
CHFR-222ENST00000544093 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
CHFR-222ENST00000544093 PSPHP1O15172 72 aa8.07□□□□□ -1.12
CHFR-222ENST00000544093 KRTAP4-9Q9BYQ8 210 aa8.04□□□□□ -1.12
CHFR-222ENST00000544093 LCE4AQ5TA78 99 aa8□□□□□ -1.13
CHFR-222ENST00000544093 KRTAP4-3Q9BYR4 195 aa7.95□□□□□ -1.14
CHFR-222ENST00000544093 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
CHFR-222ENST00000544093 A6NED7 52 aa7.85□□□□□ -1.15
CHFR-222ENST00000544093 KRTAP5-4Q6L8H1 288 aa7.83□□□□□ -1.16
CHFR-222ENST00000544093 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
CHFR-222ENST00000544093 MT4P47944 62 aa7.82□□□□□ -1.16
CHFR-222ENST00000544093 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
CHFR-222ENST00000544093 GPR98Q8WXG9 6306 aa7.82□□□□□ -1.16
CHFR-222ENST00000544093 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
CHFR-222ENST00000544093 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
CHFR-222ENST00000544093 HMCN1Q96RW7 5635 aa7.76□□□□□ -1.17
CHFR-222ENST00000544093 CDC42SE1Q9NRR8 79 aa7.69□□□□□ -1.18
CHFR-222ENST00000544093 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
CHFR-222ENST00000544093 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
CHFR-222ENST00000544093 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
CHFR-222ENST00000544093 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
CHFR-222ENST00000544093 ROMO1P60602 79 aa7.54□□□□□ -1.2
CHFR-222ENST00000544093 LCE3CQ5T5A8 94 aa7.45□□□□□ -1.22
CHFR-222ENST00000544093 LOC100996750A0A140TA64 210 aa7.44□□□□□ -1.22
CHFR-222ENST00000544093 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
CHFR-222ENST00000544093 AHNAK2Q8IVF2 5795 aa7.4□□□□□ -1.22
CHFR-222ENST00000544093 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
CHFR-222ENST00000544093 KRTAP12-4P60329 112 aa7.4□□□□□ -1.22
CHFR-222ENST00000544093 KRTAP20-2Q3LI61 65 aa7.37□□□□□ -1.23
CHFR-222ENST00000544093 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
CHFR-222ENST00000544093 SYNE1Q8NF91 8797 aaKnown RBP7.2□□□□□ -1.26
CHFR-222ENST00000544093 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
CHFR-222ENST00000544093 MT1AP04731 61 aa7.07□□□□□ -1.28
CHFR-222ENST00000544093 KRTAP5-7Q6L8G8 165 aa7.05□□□□□ -1.28
CHFR-222ENST00000544093 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
CHFR-222ENST00000544093 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
CHFR-222ENST00000544093 KRTAP5-2Q701N4 177 aa6.87□□□□□ -1.31
CHFR-222ENST00000544093 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
CHFR-222ENST00000544093 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
CHFR-222ENST00000544093 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
CHFR-222ENST00000544093 KRTAP6-2Q3LI66 62 aa6.67□□□□□ -1.34
CHFR-222ENST00000544093 MT3P25713 68 aa6.49□□□□□ -1.37
CHFR-222ENST00000544093 KRTAP5-8O75690 187 aa6.47□□□□□ -1.37
CHFR-222ENST00000544093 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
CHFR-222ENST00000544093 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
CHFR-222ENST00000544093 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
CHFR-222ENST00000544093 H3BS24 57 aa6.3□□□□□ -1.4
CHFR-222ENST00000544093 KRTAP5-1Q6L8H4 278 aa6.13□□□□□ -1.43
CHFR-222ENST00000544093 MUC5ACP98088 5654 aa6.1□□□□□ -1.43
CHFR-222ENST00000544093 MUC5BQ9HC84 5762 aaPredicted RBP6.08□□□□□ -1.44
CHFR-222ENST00000544093 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
CHFR-222ENST00000544093 LCE1EQ5T753 118 aa5.97□□□□□ -1.45
CHFR-222ENST00000544093 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
CHFR-222ENST00000544093 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
CHFR-222ENST00000544093 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
CHFR-222ENST00000544093 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
CHFR-222ENST00000544093 LCE1BQ5T7P3 118 aa5.54□□□□□ -1.52
CHFR-222ENST00000544093 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
CHFR-222ENST00000544093 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
CHFR-222ENST00000544093 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
CHFR-222ENST00000544093 INE1O15225 51 aa5.08□□□□□ -1.6
CHFR-222ENST00000544093 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
CHFR-222ENST00000544093 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
CHFR-222ENST00000544093 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
CHFR-222ENST00000544093 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
CHFR-222ENST00000544093 PHGR1C9JFL3 82 aa4.3□□□□□ -1.72
CHFR-222ENST00000544093 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
CHFR-222ENST00000544093 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
CHFR-222ENST00000544093 PRM1P04553 51 aa3.82□□□□□ -1.8
CHFR-222ENST00000544093 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
CHFR-222ENST00000544093 MUC16Q8WXI7 14507 aa2.73□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 40.5 ms