RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
ABCB1-210ENST00000543898 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
ABCB1-210ENST00000543898 MT1LQ93083 61 aa2.85□□□□□ -1.95
ABCB1-210ENST00000543898 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
ABCB1-210ENST00000543898 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
ABCB1-210ENST00000543898 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
ABCB1-210ENST00000543898 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
ABCB1-210ENST00000543898 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
ABCB1-210ENST00000543898 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
ABCB1-210ENST00000543898 MT1EP04732 61 aa2.81□□□□□ -1.96
ABCB1-210ENST00000543898 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
ABCB1-210ENST00000543898 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
ABCB1-210ENST00000543898 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
ABCB1-210ENST00000543898 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
ABCB1-210ENST00000543898 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
ABCB1-210ENST00000543898 SPRR2FQ96RM1 72 aa2.7□□□□□ -1.98
ABCB1-210ENST00000543898 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
ABCB1-210ENST00000543898 NEBP20929 6669 aa2.66□□□□□ -1.98
ABCB1-210ENST00000543898 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
ABCB1-210ENST00000543898 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.98
ABCB1-210ENST00000543898 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
ABCB1-210ENST00000543898 MT1MQ8N339 61 aa2.65□□□□□ -1.99
ABCB1-210ENST00000543898 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
ABCB1-210ENST00000543898 LCE1AQ5T7P2 110 aa2.64□□□□□ -1.99
ABCB1-210ENST00000543898 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
ABCB1-210ENST00000543898 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
ABCB1-210ENST00000543898 PRM1P04553 51 aa2.62□□□□□ -1.99
ABCB1-210ENST00000543898 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
ABCB1-210ENST00000543898 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
ABCB1-210ENST00000543898 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -2
ABCB1-210ENST00000543898 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
ABCB1-210ENST00000543898 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
ABCB1-210ENST00000543898 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
ABCB1-210ENST00000543898 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
ABCB1-210ENST00000543898 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
ABCB1-210ENST00000543898 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
ABCB1-210ENST00000543898 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
ABCB1-210ENST00000543898 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
ABCB1-210ENST00000543898 MT1AP04731 61 aa2.39□□□□□ -2.03
ABCB1-210ENST00000543898 SPRR2EP22531 72 aa2.39□□□□□ -2.03
ABCB1-210ENST00000543898 SPRR2BP35325 72 aa2.39□□□□□ -2.03
ABCB1-210ENST00000543898 SPRR2AP35326 72 aa2.39□□□□□ -2.03
ABCB1-210ENST00000543898 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
ABCB1-210ENST00000543898 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
ABCB1-210ENST00000543898 MT3P25713 68 aa2.3□□□□□ -2.04
ABCB1-210ENST00000543898 SPRR2DP22532 72 aa2.29□□□□□ -2.04
ABCB1-210ENST00000543898 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
ABCB1-210ENST00000543898 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
ABCB1-210ENST00000543898 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
ABCB1-210ENST00000543898 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
ABCB1-210ENST00000543898 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
ABCB1-210ENST00000543898 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
ABCB1-210ENST00000543898 LCE4AQ5TA78 99 aa2.15□□□□□ -2.07
ABCB1-210ENST00000543898 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
ABCB1-210ENST00000543898 MT4P47944 62 aa2.12□□□□□ -2.07
ABCB1-210ENST00000543898 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
ABCB1-210ENST00000543898 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
ABCB1-210ENST00000543898 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
ABCB1-210ENST00000543898 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
ABCB1-210ENST00000543898 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
ABCB1-210ENST00000543898 KRTAP9-9Q9BYP9 154 aa1.9□□□□□ -2.11
ABCB1-210ENST00000543898 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
ABCB1-210ENST00000543898 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
ABCB1-210ENST00000543898 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
ABCB1-210ENST00000543898 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
ABCB1-210ENST00000543898 KRTAP4-12Q9BQ66 201 aa1.77□□□□□ -2.13
ABCB1-210ENST00000543898 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
ABCB1-210ENST00000543898 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
ABCB1-210ENST00000543898 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
ABCB1-210ENST00000543898 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
ABCB1-210ENST00000543898 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
ABCB1-210ENST00000543898 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
ABCB1-210ENST00000543898 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
ABCB1-210ENST00000543898 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
ABCB1-210ENST00000543898 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
ABCB1-210ENST00000543898 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
ABCB1-210ENST00000543898 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms