RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
NPIPB4-217ENST00000543449 TMEM258P61165 79 aa3.87□□□□□ -1.79
NPIPB4-217ENST00000543449 LINC01558Q9Y6Z2 57 aa3.86□□□□□ -1.79
NPIPB4-217ENST00000543449 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
NPIPB4-217ENST00000543449 A8MU10 97 aa3.83□□□□□ -1.8
NPIPB4-217ENST00000543449 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
NPIPB4-217ENST00000543449 MT1EP04732 61 aa3.82□□□□□ -1.8
NPIPB4-217ENST00000543449 TNP1P09430 55 aa3.82□□□□□ -1.8
NPIPB4-217ENST00000543449 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
NPIPB4-217ENST00000543449 UQCR11O14957 56 aa3.8□□□□□ -1.8
NPIPB4-217ENST00000543449 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
NPIPB4-217ENST00000543449 MT1GP13640 62 aa3.75□□□□□ -1.81
NPIPB4-217ENST00000543449 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
NPIPB4-217ENST00000543449 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
NPIPB4-217ENST00000543449 V9GYY9 64 aa3.73□□□□□ -1.81
NPIPB4-217ENST00000543449 K7ERS5 55 aa3.7□□□□□ -1.82
NPIPB4-217ENST00000543449 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
NPIPB4-217ENST00000543449 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
NPIPB4-217ENST00000543449 MT1LQ93083 61 aa3.66□□□□□ -1.82
NPIPB4-217ENST00000543449 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
NPIPB4-217ENST00000543449 MT1MQ8N339 61 aa3.63□□□□□ -1.83
NPIPB4-217ENST00000543449 Q1T7F1 81 aa3.62□□□□□ -1.83
NPIPB4-217ENST00000543449 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
NPIPB4-217ENST00000543449 PSPHP1O15172 72 aa3.58□□□□□ -1.84
NPIPB4-217ENST00000543449 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
NPIPB4-217ENST00000543449 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
NPIPB4-217ENST00000543449 A6NED7 52 aa3.51□□□□□ -1.85
NPIPB4-217ENST00000543449 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
NPIPB4-217ENST00000543449 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
NPIPB4-217ENST00000543449 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
NPIPB4-217ENST00000543449 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
NPIPB4-217ENST00000543449 MT4P47944 62 aa3.44□□□□□ -1.86
NPIPB4-217ENST00000543449 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
NPIPB4-217ENST00000543449 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
NPIPB4-217ENST00000543449 ROMO1P60602 79 aa3.37□□□□□ -1.87
NPIPB4-217ENST00000543449 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
NPIPB4-217ENST00000543449 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
NPIPB4-217ENST00000543449 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
NPIPB4-217ENST00000543449 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
NPIPB4-217ENST00000543449 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
NPIPB4-217ENST00000543449 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
NPIPB4-217ENST00000543449 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
NPIPB4-217ENST00000543449 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
NPIPB4-217ENST00000543449 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
NPIPB4-217ENST00000543449 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
NPIPB4-217ENST00000543449 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
NPIPB4-217ENST00000543449 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
NPIPB4-217ENST00000543449 MT1AP04731 61 aa3.14□□□□□ -1.91
NPIPB4-217ENST00000543449 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
NPIPB4-217ENST00000543449 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
NPIPB4-217ENST00000543449 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
NPIPB4-217ENST00000543449 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
NPIPB4-217ENST00000543449 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
NPIPB4-217ENST00000543449 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
NPIPB4-217ENST00000543449 MT3P25713 68 aa2.96□□□□□ -1.94
NPIPB4-217ENST00000543449 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
NPIPB4-217ENST00000543449 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
NPIPB4-217ENST00000543449 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
NPIPB4-217ENST00000543449 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
NPIPB4-217ENST00000543449 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
NPIPB4-217ENST00000543449 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
NPIPB4-217ENST00000543449 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
NPIPB4-217ENST00000543449 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
NPIPB4-217ENST00000543449 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
NPIPB4-217ENST00000543449 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
NPIPB4-217ENST00000543449 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
NPIPB4-217ENST00000543449 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
NPIPB4-217ENST00000543449 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
NPIPB4-217ENST00000543449 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
NPIPB4-217ENST00000543449 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
NPIPB4-217ENST00000543449 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
NPIPB4-217ENST00000543449 INE1O15225 51 aa2.24□□□□□ -2.05
NPIPB4-217ENST00000543449 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
NPIPB4-217ENST00000543449 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
NPIPB4-217ENST00000543449 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
NPIPB4-217ENST00000543449 PRM1P04553 51 aa1.68□□□□□ -2.14
NPIPB4-217ENST00000543449 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
NPIPB4-217ENST00000543449 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms