RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
CACNA1C-230ENST00000543114 A8MU10 97 aa6.8□□□□□ -1.32
CACNA1C-230ENST00000543114 H7BZZ5 65 aa6.79□□□□□ -1.32
CACNA1C-230ENST00000543114 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
CACNA1C-230ENST00000543114 COX7CP15954 63 aa6.78□□□□□ -1.32
CACNA1C-230ENST00000543114 A0A1B0GU69 56 aa6.74□□□□□ -1.33
CACNA1C-230ENST00000543114 KRTAP5-10Q6L8G5 202 aa6.74□□□□□ -1.33
CACNA1C-230ENST00000543114 TNP1P09430 55 aa6.73□□□□□ -1.33
CACNA1C-230ENST00000543114 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CACNA1C-230ENST00000543114 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
CACNA1C-230ENST00000543114 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
CACNA1C-230ENST00000543114 KRTAP5-7Q6L8G8 165 aa6.49□□□□□ -1.37
CACNA1C-230ENST00000543114 KRTAP20-2Q3LI61 65 aa6.48□□□□□ -1.37
CACNA1C-230ENST00000543114 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
CACNA1C-230ENST00000543114 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
CACNA1C-230ENST00000543114 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
CACNA1C-230ENST00000543114 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
CACNA1C-230ENST00000543114 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
CACNA1C-230ENST00000543114 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
CACNA1C-230ENST00000543114 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
CACNA1C-230ENST00000543114 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
CACNA1C-230ENST00000543114 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
CACNA1C-230ENST00000543114 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-230ENST00000543114 UQCR11O14957 56 aa6.22□□□□□ -1.41
CACNA1C-230ENST00000543114 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
CACNA1C-230ENST00000543114 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
CACNA1C-230ENST00000543114 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
CACNA1C-230ENST00000543114 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
CACNA1C-230ENST00000543114 TMEM258P61165 79 aa6.01□□□□□ -1.45
CACNA1C-230ENST00000543114 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
CACNA1C-230ENST00000543114 K7ERS5 55 aa5.97□□□□□ -1.45
CACNA1C-230ENST00000543114 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
CACNA1C-230ENST00000543114 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
CACNA1C-230ENST00000543114 MT1AP04731 61 aa5.92□□□□□ -1.46
CACNA1C-230ENST00000543114 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
CACNA1C-230ENST00000543114 PSPHP1O15172 72 aa5.81□□□□□ -1.48
CACNA1C-230ENST00000543114 KRTAP5-8O75690 187 aa5.79□□□□□ -1.48
CACNA1C-230ENST00000543114 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
CACNA1C-230ENST00000543114 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
CACNA1C-230ENST00000543114 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
CACNA1C-230ENST00000543114 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
CACNA1C-230ENST00000543114 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
CACNA1C-230ENST00000543114 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
CACNA1C-230ENST00000543114 V9GYY9 64 aa5.7□□□□□ -1.5
CACNA1C-230ENST00000543114 Q1T7F1 81 aa5.68□□□□□ -1.5
CACNA1C-230ENST00000543114 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
CACNA1C-230ENST00000543114 A6NED7 52 aa5.57□□□□□ -1.52
CACNA1C-230ENST00000543114 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
CACNA1C-230ENST00000543114 ROMO1P60602 79 aa5.54□□□□□ -1.52
CACNA1C-230ENST00000543114 MT3P25713 68 aa5.4□□□□□ -1.54
CACNA1C-230ENST00000543114 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
CACNA1C-230ENST00000543114 H3BS24 57 aa5.21□□□□□ -1.58
CACNA1C-230ENST00000543114 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
CACNA1C-230ENST00000543114 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
CACNA1C-230ENST00000543114 PCP4P48539 62 aa4.67□□□□□ -1.66
CACNA1C-230ENST00000543114 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
CACNA1C-230ENST00000543114 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
CACNA1C-230ENST00000543114 BRK1Q8WUW1 75 aa4.41□□□□□ -1.7
CACNA1C-230ENST00000543114 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CACNA1C-230ENST00000543114 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
CACNA1C-230ENST00000543114 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
CACNA1C-230ENST00000543114 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
CACNA1C-230ENST00000543114 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
CACNA1C-230ENST00000543114 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
CACNA1C-230ENST00000543114 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
CACNA1C-230ENST00000543114 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
CACNA1C-230ENST00000543114 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
CACNA1C-230ENST00000543114 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
CACNA1C-230ENST00000543114 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
CACNA1C-230ENST00000543114 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
CACNA1C-230ENST00000543114 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
CACNA1C-230ENST00000543114 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
CACNA1C-230ENST00000543114 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
CACNA1C-230ENST00000543114 PRM1P04553 51 aa2.84□□□□□ -1.95
CACNA1C-230ENST00000543114 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
CACNA1C-230ENST00000543114 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
CACNA1C-230ENST00000543114 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
CACNA1C-230ENST00000543114 INE1O15225 51 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms