RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
SLC3A2-220ENST00000542922 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
SLC3A2-220ENST00000542922 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
SLC3A2-220ENST00000542922 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
SLC3A2-220ENST00000542922 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
SLC3A2-220ENST00000542922 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.64
SLC3A2-220ENST00000542922 MT1EP04732 61 aa4.82□□□□□ -1.64
SLC3A2-220ENST00000542922 MT1LQ93083 61 aa4.8□□□□□ -1.64
SLC3A2-220ENST00000542922 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
SLC3A2-220ENST00000542922 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
SLC3A2-220ENST00000542922 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
SLC3A2-220ENST00000542922 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
SLC3A2-220ENST00000542922 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
SLC3A2-220ENST00000542922 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
SLC3A2-220ENST00000542922 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SLC3A2-220ENST00000542922 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
SLC3A2-220ENST00000542922 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
SLC3A2-220ENST00000542922 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
SLC3A2-220ENST00000542922 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
SLC3A2-220ENST00000542922 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
SLC3A2-220ENST00000542922 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SLC3A2-220ENST00000542922 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
SLC3A2-220ENST00000542922 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
SLC3A2-220ENST00000542922 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
SLC3A2-220ENST00000542922 INE1O15225 51 aa4.49□□□□□ -1.69
SLC3A2-220ENST00000542922 MT1GP13640 62 aa4.49□□□□□ -1.69
SLC3A2-220ENST00000542922 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
SLC3A2-220ENST00000542922 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SLC3A2-220ENST00000542922 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
SLC3A2-220ENST00000542922 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SLC3A2-220ENST00000542922 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
SLC3A2-220ENST00000542922 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
SLC3A2-220ENST00000542922 SPRR2EP22531 72 aa4.1□□□□□ -1.75
SLC3A2-220ENST00000542922 SPRR2BP35325 72 aa4.1□□□□□ -1.75
SLC3A2-220ENST00000542922 SPRR2AP35326 72 aa4.1□□□□□ -1.75
SLC3A2-220ENST00000542922 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SLC3A2-220ENST00000542922 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
SLC3A2-220ENST00000542922 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SLC3A2-220ENST00000542922 MT1AP04731 61 aa4.01□□□□□ -1.77
SLC3A2-220ENST00000542922 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
SLC3A2-220ENST00000542922 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
SLC3A2-220ENST00000542922 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
SLC3A2-220ENST00000542922 NEBP20929 6669 aa3.94□□□□□ -1.78
SLC3A2-220ENST00000542922 SPRR2DP22532 72 aa3.92□□□□□ -1.78
SLC3A2-220ENST00000542922 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SLC3A2-220ENST00000542922 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
SLC3A2-220ENST00000542922 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
SLC3A2-220ENST00000542922 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SLC3A2-220ENST00000542922 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SLC3A2-220ENST00000542922 MT3P25713 68 aa3.58□□□□□ -1.84
SLC3A2-220ENST00000542922 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
SLC3A2-220ENST00000542922 PRM1P04553 51 aa3.51□□□□□ -1.85
SLC3A2-220ENST00000542922 MT4P47944 62 aa3.49□□□□□ -1.85
SLC3A2-220ENST00000542922 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
SLC3A2-220ENST00000542922 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
SLC3A2-220ENST00000542922 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
SLC3A2-220ENST00000542922 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
SLC3A2-220ENST00000542922 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
SLC3A2-220ENST00000542922 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
SLC3A2-220ENST00000542922 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
SLC3A2-220ENST00000542922 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SLC3A2-220ENST00000542922 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
SLC3A2-220ENST00000542922 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
SLC3A2-220ENST00000542922 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
SLC3A2-220ENST00000542922 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
SLC3A2-220ENST00000542922 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
SLC3A2-220ENST00000542922 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
SLC3A2-220ENST00000542922 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SLC3A2-220ENST00000542922 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SLC3A2-220ENST00000542922 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SLC3A2-220ENST00000542922 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SLC3A2-220ENST00000542922 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SLC3A2-220ENST00000542922 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
SLC3A2-220ENST00000542922 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SLC3A2-220ENST00000542922 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SLC3A2-220ENST00000542922 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SLC3A2-220ENST00000542922 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
SLC3A2-220ENST00000542922 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms