RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 KRTAP19-7Q3SYF9 63 aa5.95□□□□□ -1.46
NELFA-216ENST00000542778 MACF1Q9UPN3 7388 aaKnown RBP5.89□□□□□ -1.47
NELFA-216ENST00000542778 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
NELFA-216ENST00000542778 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
NELFA-216ENST00000542778 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
NELFA-216ENST00000542778 MT1EP04732 61 aa5.79□□□□□ -1.48
NELFA-216ENST00000542778 MT1LQ93083 61 aa5.71□□□□□ -1.5
NELFA-216ENST00000542778 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.51
NELFA-216ENST00000542778 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
NELFA-216ENST00000542778 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
NELFA-216ENST00000542778 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
NELFA-216ENST00000542778 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
NELFA-216ENST00000542778 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
NELFA-216ENST00000542778 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
NELFA-216ENST00000542778 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
NELFA-216ENST00000542778 MT1MQ8N339 61 aa5.44□□□□□ -1.54
NELFA-216ENST00000542778 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
NELFA-216ENST00000542778 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
NELFA-216ENST00000542778 MT1GP13640 62 aa5.39□□□□□ -1.55
NELFA-216ENST00000542778 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
NELFA-216ENST00000542778 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
NELFA-216ENST00000542778 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
NELFA-216ENST00000542778 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
NELFA-216ENST00000542778 SPRR2EP22531 72 aa5.2□□□□□ -1.58
NELFA-216ENST00000542778 SPRR2BP35325 72 aa5.2□□□□□ -1.58
NELFA-216ENST00000542778 SPRR2AP35326 72 aa5.2□□□□□ -1.58
NELFA-216ENST00000542778 NEBP20929 6669 aa5.11□□□□□ -1.59
NELFA-216ENST00000542778 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
NELFA-216ENST00000542778 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
NELFA-216ENST00000542778 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
NELFA-216ENST00000542778 MT1AP04731 61 aa4.98□□□□□ -1.61
NELFA-216ENST00000542778 SPRR2DP22532 72 aa4.98□□□□□ -1.61
NELFA-216ENST00000542778 PRM1P04553 51 aa4.94□□□□□ -1.62
NELFA-216ENST00000542778 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
NELFA-216ENST00000542778 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
NELFA-216ENST00000542778 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
NELFA-216ENST00000542778 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
NELFA-216ENST00000542778 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
NELFA-216ENST00000542778 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
NELFA-216ENST00000542778 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
NELFA-216ENST00000542778 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
NELFA-216ENST00000542778 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
NELFA-216ENST00000542778 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
NELFA-216ENST00000542778 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
NELFA-216ENST00000542778 MT4P47944 62 aa4.45□□□□□ -1.7
NELFA-216ENST00000542778 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
NELFA-216ENST00000542778 MT3P25713 68 aa4.28□□□□□ -1.72
NELFA-216ENST00000542778 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
NELFA-216ENST00000542778 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
NELFA-216ENST00000542778 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
NELFA-216ENST00000542778 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
NELFA-216ENST00000542778 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
NELFA-216ENST00000542778 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
NELFA-216ENST00000542778 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
NELFA-216ENST00000542778 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
NELFA-216ENST00000542778 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
NELFA-216ENST00000542778 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
NELFA-216ENST00000542778 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
NELFA-216ENST00000542778 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
NELFA-216ENST00000542778 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
NELFA-216ENST00000542778 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
NELFA-216ENST00000542778 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
NELFA-216ENST00000542778 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
NELFA-216ENST00000542778 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
NELFA-216ENST00000542778 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
NELFA-216ENST00000542778 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
NELFA-216ENST00000542778 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
NELFA-216ENST00000542778 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
NELFA-216ENST00000542778 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
NELFA-216ENST00000542778 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
NELFA-216ENST00000542778 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
NELFA-216ENST00000542778 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
NELFA-216ENST00000542778 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
NELFA-216ENST00000542778 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
NELFA-216ENST00000542778 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
NELFA-216ENST00000542778 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
NELFA-216ENST00000542778 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms