RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
MRPS35-204ENST00000542199 C20orf197Q8N268 126 aa3.23□□□□□ -1.89
MRPS35-204ENST00000542199 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
MRPS35-204ENST00000542199 H3BPC8 53 aa3.22□□□□□ -1.89
MRPS35-204ENST00000542199 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
MRPS35-204ENST00000542199 SPRR2EP22531 72 aa3.21□□□□□ -1.9
MRPS35-204ENST00000542199 SPRR2BP35325 72 aa3.21□□□□□ -1.9
MRPS35-204ENST00000542199 SPRR2AP35326 72 aa3.21□□□□□ -1.9
MRPS35-204ENST00000542199 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
MRPS35-204ENST00000542199 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
MRPS35-204ENST00000542199 M0QZ58 72 aa3.2□□□□□ -1.9
MRPS35-204ENST00000542199 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
MRPS35-204ENST00000542199 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
MRPS35-204ENST00000542199 RPS28P62857 69 aaKnown RBP3.15□□□□□ -1.91
MRPS35-204ENST00000542199 LINC01554Q52M75 96 aa3.15□□□□□ -1.91
MRPS35-204ENST00000542199 J3QR89 54 aa3.13□□□□□ -1.91
MRPS35-204ENST00000542199 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
MRPS35-204ENST00000542199 SPRR2DP22532 72 aa3.11□□□□□ -1.91
MRPS35-204ENST00000542199 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
MRPS35-204ENST00000542199 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
MRPS35-204ENST00000542199 ACYP2P14621 99 aa3.1□□□□□ -1.91
MRPS35-204ENST00000542199 MT-ATP8P03928 68 aa3.07□□□□□ -1.92
MRPS35-204ENST00000542199 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
MRPS35-204ENST00000542199 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
MRPS35-204ENST00000542199 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
MRPS35-204ENST00000542199 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
MRPS35-204ENST00000542199 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
MRPS35-204ENST00000542199 SNURFQ9Y675 71 aa3□□□□□ -1.93
MRPS35-204ENST00000542199 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
MRPS35-204ENST00000542199 CCDC179H3BU77 68 aa2.96□□□□□ -1.94
MRPS35-204ENST00000542199 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
MRPS35-204ENST00000542199 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
MRPS35-204ENST00000542199 MT1EP04732 61 aa2.93□□□□□ -1.94
MRPS35-204ENST00000542199 SERP2Q8N6R1 65 aa2.93□□□□□ -1.94
MRPS35-204ENST00000542199 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
MRPS35-204ENST00000542199 COA5Q86WW8 74 aa2.9□□□□□ -1.95
MRPS35-204ENST00000542199 TMEM258P61165 79 aa2.89□□□□□ -1.95
MRPS35-204ENST00000542199 A0A0D9SG42 100 aa2.87□□□□□ -1.95
MRPS35-204ENST00000542199 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
MRPS35-204ENST00000542199 SPATA8Q6RVD6 105 aa2.86□□□□□ -1.95
MRPS35-204ENST00000542199 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
MRPS35-204ENST00000542199 SERP1Q9Y6X1 66 aa2.86□□□□□ -1.95
MRPS35-204ENST00000542199 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
MRPS35-204ENST00000542199 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
MRPS35-204ENST00000542199 MT1GP13640 62 aa2.82□□□□□ -1.96
MRPS35-204ENST00000542199 CYSTM1Q9H1C7 97 aa2.82□□□□□ -1.96
MRPS35-204ENST00000542199 H7BZZ5 65 aa2.8□□□□□ -1.96
MRPS35-204ENST00000542199 COX7CP15954 63 aa2.8□□□□□ -1.96
MRPS35-204ENST00000542199 MT1MQ8N339 61 aa2.79□□□□□ -1.96
MRPS35-204ENST00000542199 MT1LQ93083 61 aa2.78□□□□□ -1.96
MRPS35-204ENST00000542199 A0A1B0GU69 56 aa2.74□□□□□ -1.97
MRPS35-204ENST00000542199 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
MRPS35-204ENST00000542199 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
MRPS35-204ENST00000542199 MT4P47944 62 aa2.72□□□□□ -1.97
MRPS35-204ENST00000542199 TNP1P09430 55 aa2.7□□□□□ -1.98
MRPS35-204ENST00000542199 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
MRPS35-204ENST00000542199 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
MRPS35-204ENST00000542199 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
MRPS35-204ENST00000542199 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
MRPS35-204ENST00000542199 Q1T7F1 81 aa2.63□□□□□ -1.99
MRPS35-204ENST00000542199 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
MRPS35-204ENST00000542199 LINC01558Q9Y6Z2 57 aa2.61□□□□□ -1.99
MRPS35-204ENST00000542199 UQCR11O14957 56 aa2.55□□□□□ -2
MRPS35-204ENST00000542199 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
MRPS35-204ENST00000542199 ROMO1P60602 79 aa2.51□□□□□ -2.01
MRPS35-204ENST00000542199 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
MRPS35-204ENST00000542199 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
MRPS35-204ENST00000542199 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
MRPS35-204ENST00000542199 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
MRPS35-204ENST00000542199 MT1AP04731 61 aa2.36□□□□□ -2.03
MRPS35-204ENST00000542199 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
MRPS35-204ENST00000542199 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
MRPS35-204ENST00000542199 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
MRPS35-204ENST00000542199 INE1O15225 51 aa2.03□□□□□ -2.08
MRPS35-204ENST00000542199 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
MRPS35-204ENST00000542199 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
MRPS35-204ENST00000542199 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
MRPS35-204ENST00000542199 PRM1P04553 51 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 101 ms