RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 M0R2T5 61 aa1.63□□□□□ -2.15
SNHG1-217ENST00000541578 MMP24-AS1A0A0U1RRL7 71 aa1.61□□□□□ -2.15
SNHG1-217ENST00000541578 COX6B2Q6YFQ2 88 aa1.61□□□□□ -2.15
SNHG1-217ENST00000541578 Q6ZRX8 168 aa1.61□□□□□ -2.15
SNHG1-217ENST00000541578 MRPL34Q9BQ48 92 aaKnown RBP1.61□□□□□ -2.15
SNHG1-217ENST00000541578 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
SNHG1-217ENST00000541578 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
SNHG1-217ENST00000541578 H0YAA0 97 aa1.59□□□□□ -2.15
SNHG1-217ENST00000541578 SPINK1P00995 79 aa1.59□□□□□ -2.15
SNHG1-217ENST00000541578 SPRR1AP35321 89 aa1.59□□□□□ -2.15
SNHG1-217ENST00000541578 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
SNHG1-217ENST00000541578 RPS29P62273 56 aaKnown RBP1.57□□□□□ -2.16
SNHG1-217ENST00000541578 MT1HP80294 61 aa1.56□□□□□ -2.16
SNHG1-217ENST00000541578 DEFB105AQ8NG35 78 aa1.56□□□□□ -2.16
SNHG1-217ENST00000541578 SPRR1BP22528 89 aa1.55□□□□□ -2.16
SNHG1-217ENST00000541578 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
SNHG1-217ENST00000541578 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
SNHG1-217ENST00000541578 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
SNHG1-217ENST00000541578 PRLHP81277 87 aa1.52□□□□□ -2.17
SNHG1-217ENST00000541578 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-217ENST00000541578 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
SNHG1-217ENST00000541578 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
SNHG1-217ENST00000541578 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
SNHG1-217ENST00000541578 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
SNHG1-217ENST00000541578 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
SNHG1-217ENST00000541578 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
SNHG1-217ENST00000541578 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
SNHG1-217ENST00000541578 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
SNHG1-217ENST00000541578 USH2AO75445 5202 aa1.45□□□□□ -2.18
SNHG1-217ENST00000541578 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
SNHG1-217ENST00000541578 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
SNHG1-217ENST00000541578 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
SNHG1-217ENST00000541578 S4R3F8 94 aa1.42□□□□□ -2.18
SNHG1-217ENST00000541578 NEBP20929 6669 aa1.41□□□□□ -2.18
SNHG1-217ENST00000541578 MT2AP02795 61 aa1.4□□□□□ -2.19
SNHG1-217ENST00000541578 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
SNHG1-217ENST00000541578 MT1FP04733 61 aa1.37□□□□□ -2.19
SNHG1-217ENST00000541578 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
SNHG1-217ENST00000541578 A0A0D9SG42 100 aa1.34□□□□□ -2.19
SNHG1-217ENST00000541578 M0QZ58 72 aa1.32□□□□□ -2.2
SNHG1-217ENST00000541578 SPRR2EP22531 72 aa1.31□□□□□ -2.2
SNHG1-217ENST00000541578 SPRR2BP35325 72 aa1.31□□□□□ -2.2
SNHG1-217ENST00000541578 SPRR2AP35326 72 aa1.31□□□□□ -2.2
SNHG1-217ENST00000541578 KMT2DO14686 5537 aa1.31□□□□□ -2.2
SNHG1-217ENST00000541578 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
SNHG1-217ENST00000541578 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
SNHG1-217ENST00000541578 SPRR2DP22532 72 aa1.27□□□□□ -2.21
SNHG1-217ENST00000541578 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
SNHG1-217ENST00000541578 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
SNHG1-217ENST00000541578 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
SNHG1-217ENST00000541578 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
SNHG1-217ENST00000541578 MT1BP07438 61 aa1.22□□□□□ -2.21
SNHG1-217ENST00000541578 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
SNHG1-217ENST00000541578 TNP1P09430 55 aa1.18□□□□□ -2.22
SNHG1-217ENST00000541578 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
SNHG1-217ENST00000541578 MT4P47944 62 aa1.1□□□□□ -2.23
SNHG1-217ENST00000541578 MT1XP80297 61 aa1.1□□□□□ -2.23
SNHG1-217ENST00000541578 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
SNHG1-217ENST00000541578 MT1GP13640 62 aa1.07□□□□□ -2.24
SNHG1-217ENST00000541578 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
SNHG1-217ENST00000541578 MT1EP04732 61 aa1□□□□□ -2.25
SNHG1-217ENST00000541578 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
SNHG1-217ENST00000541578 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
SNHG1-217ENST00000541578 MT1MQ8N339 61 aa0.97□□□□□ -2.25
SNHG1-217ENST00000541578 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
SNHG1-217ENST00000541578 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
SNHG1-217ENST00000541578 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
SNHG1-217ENST00000541578 MT1LQ93083 61 aa0.93□□□□□ -2.26
SNHG1-217ENST00000541578 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
SNHG1-217ENST00000541578 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SNHG1-217ENST00000541578 PRM1P04553 51 aa0.87□□□□□ -2.27
SNHG1-217ENST00000541578 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
SNHG1-217ENST00000541578 MT1AP04731 61 aa0.82□□□□□ -2.28
SNHG1-217ENST00000541578 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
SNHG1-217ENST00000541578 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
SNHG1-217ENST00000541578 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SNHG1-217ENST00000541578 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 99.6 ms