RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 MT1LQ93083 61 aa8.5□□□□□ -1.05
LEMD3-203ENST00000541171 UQCR11O14957 56 aa8.48□□□□□ -1.05
LEMD3-203ENST00000541171 AHNAK2Q8IVF2 5795 aa8.46□□□□□ -1.05
LEMD3-203ENST00000541171 KRTAP4-3Q9BYR4 195 aa8.43□□□□□ -1.06
LEMD3-203ENST00000541171 V9GYY9 64 aa8.41□□□□□ -1.06
LEMD3-203ENST00000541171 KRTAP5-4Q6L8H1 288 aa8.35□□□□□ -1.07
LEMD3-203ENST00000541171 Q1T7F1 81 aa8.34□□□□□ -1.07
LEMD3-203ENST00000541171 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
LEMD3-203ENST00000541171 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
LEMD3-203ENST00000541171 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
LEMD3-203ENST00000541171 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
LEMD3-203ENST00000541171 KRTAP5-10Q6L8G5 202 aa8.29□□□□□ -1.08
LEMD3-203ENST00000541171 TNP1P09430 55 aa8.28□□□□□ -1.08
LEMD3-203ENST00000541171 PCP4P48539 62 aa8.26□□□□□ -1.09
LEMD3-203ENST00000541171 PSPHP1O15172 72 aa8.24□□□□□ -1.09
LEMD3-203ENST00000541171 K7ERS5 55 aa8.12□□□□□ -1.11
LEMD3-203ENST00000541171 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
LEMD3-203ENST00000541171 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
LEMD3-203ENST00000541171 KRTAP5-3Q6L8H2 238 aa8.03□□□□□ -1.12
LEMD3-203ENST00000541171 KRTAP5-7Q6L8G8 165 aa8.02□□□□□ -1.13
LEMD3-203ENST00000541171 A6NED7 52 aa8□□□□□ -1.13
LEMD3-203ENST00000541171 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
LEMD3-203ENST00000541171 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
LEMD3-203ENST00000541171 KRTAP20-2Q3LI61 65 aa7.95□□□□□ -1.14
LEMD3-203ENST00000541171 KRTAP5-5Q701N2 237 aaPredicted RBP7.84□□□□□ -1.15
LEMD3-203ENST00000541171 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
LEMD3-203ENST00000541171 KRTAP12-4P60329 112 aa7.78□□□□□ -1.16
LEMD3-203ENST00000541171 SYNE1Q8NF91 8797 aaKnown RBP7.72□□□□□ -1.17
LEMD3-203ENST00000541171 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
LEMD3-203ENST00000541171 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
LEMD3-203ENST00000541171 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
LEMD3-203ENST00000541171 ROMO1P60602 79 aa7.59□□□□□ -1.19
LEMD3-203ENST00000541171 KRTAP19-4Q3LI73 84 aa7.51□□□□□ -1.21
LEMD3-203ENST00000541171 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
LEMD3-203ENST00000541171 KRTAP4-11Q9BYQ6 195 aa7.35□□□□□ -1.23
LEMD3-203ENST00000541171 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
LEMD3-203ENST00000541171 KRTAP5-2Q701N4 177 aa7.24□□□□□ -1.25
LEMD3-203ENST00000541171 MT1AP04731 61 aa7.22□□□□□ -1.25
LEMD3-203ENST00000541171 KRTAP6-1Q3LI64 71 aa7.22□□□□□ -1.25
LEMD3-203ENST00000541171 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
LEMD3-203ENST00000541171 KRTAP5-8O75690 187 aa7.11□□□□□ -1.27
LEMD3-203ENST00000541171 AHNAKQ09666 5890 aaKnown RBP7.08□□□□□ -1.28
LEMD3-203ENST00000541171 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
LEMD3-203ENST00000541171 MUC5BQ9HC84 5762 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-203ENST00000541171 MUC5ACP98088 5654 aa7.01□□□□□ -1.29
LEMD3-203ENST00000541171 OBSCNQ5VST9 7968 aa7.01□□□□□ -1.29
LEMD3-203ENST00000541171 KRTAP6-2Q3LI66 62 aa6.99□□□□□ -1.29
LEMD3-203ENST00000541171 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
LEMD3-203ENST00000541171 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
LEMD3-203ENST00000541171 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
LEMD3-203ENST00000541171 MT3P25713 68 aa6.63□□□□□ -1.35
LEMD3-203ENST00000541171 KRTAP5-1Q6L8H4 278 aa6.58□□□□□ -1.36
LEMD3-203ENST00000541171 PRO0628Q9UI54 55 aa6.48□□□□□ -1.37
LEMD3-203ENST00000541171 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
LEMD3-203ENST00000541171 LCE1EQ5T753 118 aa6.14□□□□□ -1.43
LEMD3-203ENST00000541171 KTN1-AS1Q86SY8 53 aa6.12□□□□□ -1.43
LEMD3-203ENST00000541171 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
LEMD3-203ENST00000541171 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
LEMD3-203ENST00000541171 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
LEMD3-203ENST00000541171 LCE1CQ5T751 118 aa5.71□□□□□ -1.5
LEMD3-203ENST00000541171 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
LEMD3-203ENST00000541171 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
LEMD3-203ENST00000541171 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
LEMD3-203ENST00000541171 KRTAP5-11Q6L8G4 156 aa5.19□□□□□ -1.58
LEMD3-203ENST00000541171 LCE1FQ5T754 118 aa5.13□□□□□ -1.59
LEMD3-203ENST00000541171 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.12□□□□□ -1.59
LEMD3-203ENST00000541171 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
LEMD3-203ENST00000541171 PHGR1C9JFL3 82 aa4.88□□□□□ -1.63
LEMD3-203ENST00000541171 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
LEMD3-203ENST00000541171 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
LEMD3-203ENST00000541171 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
LEMD3-203ENST00000541171 MUC19Q7Z5P9 8384 aa4.33□□□□□ -1.72
LEMD3-203ENST00000541171 PRM1P04553 51 aa3.88□□□□□ -1.79
LEMD3-203ENST00000541171 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
LEMD3-203ENST00000541171 INE1O15225 51 aa3.77□□□□□ -1.81
LEMD3-203ENST00000541171 KRTAP21-1Q3LI58 79 aa3.68□□□□□ -1.82
LEMD3-203ENST00000541171 H3BS24 57 aa3.22□□□□□ -1.89
LEMD3-203ENST00000541171 MUC16Q8WXI7 14507 aa3.02□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 15 ms