RNA–Protein interactions for RNA: ENST00000541013.2

GOLGA3-206, Transcript of golgin A3, humanhuman

TSL 3

Gene GOLGA3, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-206ENST00000541013 MT1LQ93083 61 aa5.64□□□□□ -1.51
GOLGA3-206ENST00000541013 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
GOLGA3-206ENST00000541013 MT1GP13640 62 aa5.61□□□□□ -1.51
GOLGA3-206ENST00000541013 A6NED7 52 aa5.6□□□□□ -1.51
GOLGA3-206ENST00000541013 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
GOLGA3-206ENST00000541013 K7ERS5 55 aa5.58□□□□□ -1.52
GOLGA3-206ENST00000541013 MT1MQ8N339 61 aa5.58□□□□□ -1.52
GOLGA3-206ENST00000541013 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
GOLGA3-206ENST00000541013 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
GOLGA3-206ENST00000541013 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
GOLGA3-206ENST00000541013 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
GOLGA3-206ENST00000541013 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
GOLGA3-206ENST00000541013 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
GOLGA3-206ENST00000541013 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
GOLGA3-206ENST00000541013 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
GOLGA3-206ENST00000541013 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
GOLGA3-206ENST00000541013 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
GOLGA3-206ENST00000541013 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
GOLGA3-206ENST00000541013 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
GOLGA3-206ENST00000541013 MT4P47944 62 aa5.31□□□□□ -1.56
GOLGA3-206ENST00000541013 ROMO1P60602 79 aa5.31□□□□□ -1.56
GOLGA3-206ENST00000541013 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
GOLGA3-206ENST00000541013 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
GOLGA3-206ENST00000541013 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
GOLGA3-206ENST00000541013 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
GOLGA3-206ENST00000541013 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
GOLGA3-206ENST00000541013 KRTAP5-10Q6L8G5 202 aa5.15□□□□□ -1.59
GOLGA3-206ENST00000541013 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
GOLGA3-206ENST00000541013 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
GOLGA3-206ENST00000541013 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
GOLGA3-206ENST00000541013 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
GOLGA3-206ENST00000541013 BRK1Q8WUW1 75 aa5□□□□□ -1.61
GOLGA3-206ENST00000541013 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
GOLGA3-206ENST00000541013 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
GOLGA3-206ENST00000541013 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
GOLGA3-206ENST00000541013 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
GOLGA3-206ENST00000541013 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
GOLGA3-206ENST00000541013 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
GOLGA3-206ENST00000541013 H3BS24 57 aa4.85□□□□□ -1.63
GOLGA3-206ENST00000541013 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
GOLGA3-206ENST00000541013 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
GOLGA3-206ENST00000541013 MT1AP04731 61 aa4.77□□□□□ -1.65
GOLGA3-206ENST00000541013 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
GOLGA3-206ENST00000541013 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
GOLGA3-206ENST00000541013 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
GOLGA3-206ENST00000541013 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
GOLGA3-206ENST00000541013 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
GOLGA3-206ENST00000541013 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
GOLGA3-206ENST00000541013 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
GOLGA3-206ENST00000541013 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
GOLGA3-206ENST00000541013 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
GOLGA3-206ENST00000541013 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
GOLGA3-206ENST00000541013 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
GOLGA3-206ENST00000541013 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
GOLGA3-206ENST00000541013 MT3P25713 68 aa4.33□□□□□ -1.72
GOLGA3-206ENST00000541013 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
GOLGA3-206ENST00000541013 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
GOLGA3-206ENST00000541013 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
GOLGA3-206ENST00000541013 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
GOLGA3-206ENST00000541013 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
GOLGA3-206ENST00000541013 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
GOLGA3-206ENST00000541013 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
GOLGA3-206ENST00000541013 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
GOLGA3-206ENST00000541013 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
GOLGA3-206ENST00000541013 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
GOLGA3-206ENST00000541013 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
GOLGA3-206ENST00000541013 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
GOLGA3-206ENST00000541013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
GOLGA3-206ENST00000541013 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
GOLGA3-206ENST00000541013 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
GOLGA3-206ENST00000541013 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
GOLGA3-206ENST00000541013 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
GOLGA3-206ENST00000541013 INE1O15225 51 aa2.94□□□□□ -1.94
GOLGA3-206ENST00000541013 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
GOLGA3-206ENST00000541013 PRM1P04553 51 aa2.77□□□□□ -1.97
GOLGA3-206ENST00000541013 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
GOLGA3-206ENST00000541013 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
GOLGA3-206ENST00000541013 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms