RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 KRTAP4-3Q9BYR4 195 aa7.31□□□□□ -1.24
PTMS-205ENST00000540828 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
PTMS-205ENST00000540828 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
PTMS-205ENST00000540828 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
PTMS-205ENST00000540828 LCE1DQ5T752 114 aa7.26□□□□□ -1.25
PTMS-205ENST00000540828 GPR98Q8WXG9 6306 aa7.22□□□□□ -1.25
PTMS-205ENST00000540828 MT4P47944 62 aa7.16□□□□□ -1.26
PTMS-205ENST00000540828 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
PTMS-205ENST00000540828 KRTAP5-4Q6L8H1 288 aa7.16□□□□□ -1.26
PTMS-205ENST00000540828 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PTMS-205ENST00000540828 HMCN1Q96RW7 5635 aa7.15□□□□□ -1.27
PTMS-205ENST00000540828 V9GYY9 64 aa7.14□□□□□ -1.27
PTMS-205ENST00000540828 K7ERS5 55 aa7.11□□□□□ -1.27
PTMS-205ENST00000540828 PSPHP1O15172 72 aa7.11□□□□□ -1.27
PTMS-205ENST00000540828 Q1T7F1 81 aa7.11□□□□□ -1.27
PTMS-205ENST00000540828 KRTAP4-6Q9BYQ5 205 aa6.99□□□□□ -1.29
PTMS-205ENST00000540828 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
PTMS-205ENST00000540828 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
PTMS-205ENST00000540828 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
PTMS-205ENST00000540828 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
PTMS-205ENST00000540828 A6NED7 52 aa6.85□□□□□ -1.31
PTMS-205ENST00000540828 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
PTMS-205ENST00000540828 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
PTMS-205ENST00000540828 KRTAP5-10Q6L8G5 202 aa6.75□□□□□ -1.33
PTMS-205ENST00000540828 KRTAP20-2Q3LI61 65 aa6.74□□□□□ -1.33
PTMS-205ENST00000540828 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
PTMS-205ENST00000540828 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
PTMS-205ENST00000540828 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
PTMS-205ENST00000540828 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
PTMS-205ENST00000540828 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
PTMS-205ENST00000540828 ROMO1P60602 79 aa6.65□□□□□ -1.34
PTMS-205ENST00000540828 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
PTMS-205ENST00000540828 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
PTMS-205ENST00000540828 PCP4P48539 62 aa6.53□□□□□ -1.36
PTMS-205ENST00000540828 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
PTMS-205ENST00000540828 MT1AP04731 61 aa6.4□□□□□ -1.38
PTMS-205ENST00000540828 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
PTMS-205ENST00000540828 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
PTMS-205ENST00000540828 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
PTMS-205ENST00000540828 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
PTMS-205ENST00000540828 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
PTMS-205ENST00000540828 KRTAP6-2Q3LI66 62 aa6.07□□□□□ -1.44
PTMS-205ENST00000540828 KRTAP5-8O75690 187 aa5.95□□□□□ -1.46
PTMS-205ENST00000540828 MT3P25713 68 aa5.86□□□□□ -1.47
PTMS-205ENST00000540828 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
PTMS-205ENST00000540828 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
PTMS-205ENST00000540828 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
PTMS-205ENST00000540828 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
PTMS-205ENST00000540828 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
PTMS-205ENST00000540828 MUC5ACP98088 5654 aa5.63□□□□□ -1.51
PTMS-205ENST00000540828 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
PTMS-205ENST00000540828 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
PTMS-205ENST00000540828 LCE1EQ5T753 118 aa5.4□□□□□ -1.54
PTMS-205ENST00000540828 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
PTMS-205ENST00000540828 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
PTMS-205ENST00000540828 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
PTMS-205ENST00000540828 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
PTMS-205ENST00000540828 LCE1CQ5T751 118 aa5□□□□□ -1.61
PTMS-205ENST00000540828 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PTMS-205ENST00000540828 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
PTMS-205ENST00000540828 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
PTMS-205ENST00000540828 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
PTMS-205ENST00000540828 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
PTMS-205ENST00000540828 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
PTMS-205ENST00000540828 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
PTMS-205ENST00000540828 H3BS24 57 aa4.51□□□□□ -1.69
PTMS-205ENST00000540828 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
PTMS-205ENST00000540828 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
PTMS-205ENST00000540828 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
PTMS-205ENST00000540828 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
PTMS-205ENST00000540828 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
PTMS-205ENST00000540828 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
PTMS-205ENST00000540828 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
PTMS-205ENST00000540828 PRM1P04553 51 aa3.39□□□□□ -1.87
PTMS-205ENST00000540828 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PTMS-205ENST00000540828 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
PTMS-205ENST00000540828 INE1O15225 51 aa2.8□□□□□ -1.96
PTMS-205ENST00000540828 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms