RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
MSRB3-209ENST00000540804 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
MSRB3-209ENST00000540804 MT4P47944 62 aa5.12□□□□□ -1.59
MSRB3-209ENST00000540804 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
MSRB3-209ENST00000540804 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
MSRB3-209ENST00000540804 A0A1B0GU69 56 aa5.09□□□□□ -1.59
MSRB3-209ENST00000540804 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
MSRB3-209ENST00000540804 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
MSRB3-209ENST00000540804 H3BS24 57 aa5.06□□□□□ -1.6
MSRB3-209ENST00000540804 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
MSRB3-209ENST00000540804 TNP1P09430 55 aa5□□□□□ -1.61
MSRB3-209ENST00000540804 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
MSRB3-209ENST00000540804 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
MSRB3-209ENST00000540804 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
MSRB3-209ENST00000540804 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
MSRB3-209ENST00000540804 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
MSRB3-209ENST00000540804 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
MSRB3-209ENST00000540804 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
MSRB3-209ENST00000540804 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
MSRB3-209ENST00000540804 V9GYY9 64 aa4.81□□□□□ -1.64
MSRB3-209ENST00000540804 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
MSRB3-209ENST00000540804 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
MSRB3-209ENST00000540804 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
MSRB3-209ENST00000540804 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
MSRB3-209ENST00000540804 UQCR11O14957 56 aa4.7□□□□□ -1.66
MSRB3-209ENST00000540804 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
MSRB3-209ENST00000540804 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
MSRB3-209ENST00000540804 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
MSRB3-209ENST00000540804 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
MSRB3-209ENST00000540804 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
MSRB3-209ENST00000540804 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
MSRB3-209ENST00000540804 TMEM258P61165 79 aa4.59□□□□□ -1.67
MSRB3-209ENST00000540804 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
MSRB3-209ENST00000540804 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
MSRB3-209ENST00000540804 PSPHP1O15172 72 aa4.48□□□□□ -1.69
MSRB3-209ENST00000540804 K7ERS5 55 aa4.47□□□□□ -1.69
MSRB3-209ENST00000540804 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
MSRB3-209ENST00000540804 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
MSRB3-209ENST00000540804 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
MSRB3-209ENST00000540804 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
MSRB3-209ENST00000540804 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
MSRB3-209ENST00000540804 MT1AP04731 61 aa4.35□□□□□ -1.71
MSRB3-209ENST00000540804 Q1T7F1 81 aa4.35□□□□□ -1.71
MSRB3-209ENST00000540804 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
MSRB3-209ENST00000540804 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
MSRB3-209ENST00000540804 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
MSRB3-209ENST00000540804 A6NED7 52 aa4.27□□□□□ -1.73
MSRB3-209ENST00000540804 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
MSRB3-209ENST00000540804 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
MSRB3-209ENST00000540804 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
MSRB3-209ENST00000540804 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
MSRB3-209ENST00000540804 ROMO1P60602 79 aa4.2□□□□□ -1.74
MSRB3-209ENST00000540804 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
MSRB3-209ENST00000540804 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
MSRB3-209ENST00000540804 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
MSRB3-209ENST00000540804 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
MSRB3-209ENST00000540804 MT3P25713 68 aa3.97□□□□□ -1.77
MSRB3-209ENST00000540804 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
MSRB3-209ENST00000540804 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
MSRB3-209ENST00000540804 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
MSRB3-209ENST00000540804 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
MSRB3-209ENST00000540804 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
MSRB3-209ENST00000540804 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
MSRB3-209ENST00000540804 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
MSRB3-209ENST00000540804 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
MSRB3-209ENST00000540804 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
MSRB3-209ENST00000540804 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
MSRB3-209ENST00000540804 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
MSRB3-209ENST00000540804 LCE1FQ5T754 118 aa3□□□□□ -1.93
MSRB3-209ENST00000540804 INE1O15225 51 aa2.99□□□□□ -1.93
MSRB3-209ENST00000540804 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
MSRB3-209ENST00000540804 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
MSRB3-209ENST00000540804 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
MSRB3-209ENST00000540804 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
MSRB3-209ENST00000540804 PRM1P04553 51 aa2.18□□□□□ -2.06
MSRB3-209ENST00000540804 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
MSRB3-209ENST00000540804 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 31.1 ms