RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
SSH2-204ENST00000540801 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
SSH2-204ENST00000540801 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
SSH2-204ENST00000540801 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
SSH2-204ENST00000540801 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
SSH2-204ENST00000540801 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
SSH2-204ENST00000540801 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
SSH2-204ENST00000540801 KRTAP19-4Q3LI73 84 aa2.22□□□□□ -2.05
SSH2-204ENST00000540801 SPRR2EP22531 72 aa2.21□□□□□ -2.05
SSH2-204ENST00000540801 SPRR2BP35325 72 aa2.21□□□□□ -2.05
SSH2-204ENST00000540801 SPRR2AP35326 72 aa2.21□□□□□ -2.05
SSH2-204ENST00000540801 MT1EP04732 61 aa2.18□□□□□ -2.06
SSH2-204ENST00000540801 MT1LQ93083 61 aa2.17□□□□□ -2.06
SSH2-204ENST00000540801 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
SSH2-204ENST00000540801 MT3P25713 68 aa2.16□□□□□ -2.06
SSH2-204ENST00000540801 SPRR2DP22532 72 aa2.14□□□□□ -2.07
SSH2-204ENST00000540801 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
SSH2-204ENST00000540801 KRTAP19-6Q3LI70 58 aa2.12□□□□□ -2.07
SSH2-204ENST00000540801 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
SSH2-204ENST00000540801 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
SSH2-204ENST00000540801 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
SSH2-204ENST00000540801 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.06□□□□□ -2.08
SSH2-204ENST00000540801 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
SSH2-204ENST00000540801 MT1GP13640 62 aa2.04□□□□□ -2.08
SSH2-204ENST00000540801 KRTAP4-9Q9BYQ8 210 aa2.03□□□□□ -2.08
SSH2-204ENST00000540801 MT1MQ8N339 61 aa2.01□□□□□ -2.09
SSH2-204ENST00000540801 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
SSH2-204ENST00000540801 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
SSH2-204ENST00000540801 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
SSH2-204ENST00000540801 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
SSH2-204ENST00000540801 MT4P47944 62 aa1.94□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
SSH2-204ENST00000540801 LCE3BQ5TA77 95 aa1.91□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
SSH2-204ENST00000540801 KRTAP9-4Q9BYQ2 154 aa1.91□□□□□ -2.1
SSH2-204ENST00000540801 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.11
SSH2-204ENST00000540801 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
SSH2-204ENST00000540801 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
SSH2-204ENST00000540801 NEBP20929 6669 aa1.84□□□□□ -2.12
SSH2-204ENST00000540801 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
SSH2-204ENST00000540801 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
SSH2-204ENST00000540801 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
SSH2-204ENST00000540801 LCE1DQ5T752 114 aa1.76□□□□□ -2.13
SSH2-204ENST00000540801 KRTAP2-2Q9BYT5 123 aa1.75□□□□□ -2.13
SSH2-204ENST00000540801 PRM1P04553 51 aa1.74□□□□□ -2.13
SSH2-204ENST00000540801 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
SSH2-204ENST00000540801 MT1AP04731 61 aa1.7□□□□□ -2.14
SSH2-204ENST00000540801 KRTAP4-6Q9BYQ5 205 aa1.69□□□□□ -2.14
SSH2-204ENST00000540801 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
SSH2-204ENST00000540801 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.14
SSH2-204ENST00000540801 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
SSH2-204ENST00000540801 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
SSH2-204ENST00000540801 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SSH2-204ENST00000540801 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
SSH2-204ENST00000540801 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
SSH2-204ENST00000540801 KRTAP5-3Q6L8H2 238 aa1.54□□□□□ -2.16
SSH2-204ENST00000540801 KRTAP4-12Q9BQ66 201 aa1.54□□□□□ -2.16
SSH2-204ENST00000540801 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SSH2-204ENST00000540801 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
SSH2-204ENST00000540801 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
SSH2-204ENST00000540801 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
SSH2-204ENST00000540801 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
SSH2-204ENST00000540801 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
SSH2-204ENST00000540801 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.19
SSH2-204ENST00000540801 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
SSH2-204ENST00000540801 KRTAP4-11Q9BYQ6 195 aa1.34□□□□□ -2.2
SSH2-204ENST00000540801 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
SSH2-204ENST00000540801 KRTAP5-8O75690 187 aa1.28□□□□□ -2.2
SSH2-204ENST00000540801 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
SSH2-204ENST00000540801 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
SSH2-204ENST00000540801 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
SSH2-204ENST00000540801 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SSH2-204ENST00000540801 KRTAP5-11Q6L8G4 156 aa1.04□□□□□ -2.24
SSH2-204ENST00000540801 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 58.6 ms