RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 COX7CP15954 63 aa6.55□□□□□ -1.36
SOD2-212ENST00000540491 H7BZZ5 65 aa6.52□□□□□ -1.37
SOD2-212ENST00000540491 A8MU10 97 aa6.51□□□□□ -1.37
SOD2-212ENST00000540491 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
SOD2-212ENST00000540491 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
SOD2-212ENST00000540491 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
SOD2-212ENST00000540491 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
SOD2-212ENST00000540491 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
SOD2-212ENST00000540491 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
SOD2-212ENST00000540491 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
SOD2-212ENST00000540491 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
SOD2-212ENST00000540491 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
SOD2-212ENST00000540491 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
SOD2-212ENST00000540491 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
SOD2-212ENST00000540491 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
SOD2-212ENST00000540491 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
SOD2-212ENST00000540491 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
SOD2-212ENST00000540491 UQCR11O14957 56 aa6.12□□□□□ -1.43
SOD2-212ENST00000540491 ANAPC13Q9BS18 74 aa6.11□□□□□ -1.43
SOD2-212ENST00000540491 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
SOD2-212ENST00000540491 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SOD2-212ENST00000540491 K7ERS5 55 aa5.95□□□□□ -1.46
SOD2-212ENST00000540491 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
SOD2-212ENST00000540491 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
SOD2-212ENST00000540491 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
SOD2-212ENST00000540491 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
SOD2-212ENST00000540491 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SOD2-212ENST00000540491 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
SOD2-212ENST00000540491 MT1AP04731 61 aa5.82□□□□□ -1.48
SOD2-212ENST00000540491 TMEM258P61165 79 aa5.8□□□□□ -1.48
SOD2-212ENST00000540491 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
SOD2-212ENST00000540491 KRTAP5-8O75690 187 aa5.7□□□□□ -1.5
SOD2-212ENST00000540491 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
SOD2-212ENST00000540491 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
SOD2-212ENST00000540491 V9GYY9 64 aa5.65□□□□□ -1.5
SOD2-212ENST00000540491 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
SOD2-212ENST00000540491 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
SOD2-212ENST00000540491 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
SOD2-212ENST00000540491 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
SOD2-212ENST00000540491 PSPHP1O15172 72 aa5.54□□□□□ -1.52
SOD2-212ENST00000540491 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
SOD2-212ENST00000540491 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
SOD2-212ENST00000540491 Q1T7F1 81 aa5.52□□□□□ -1.53
SOD2-212ENST00000540491 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
SOD2-212ENST00000540491 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
SOD2-212ENST00000540491 ROMO1P60602 79 aa5.4□□□□□ -1.54
SOD2-212ENST00000540491 A6NED7 52 aa5.39□□□□□ -1.55
SOD2-212ENST00000540491 MT3P25713 68 aa5.38□□□□□ -1.55
SOD2-212ENST00000540491 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
SOD2-212ENST00000540491 PCP4P48539 62 aa5.17□□□□□ -1.58
SOD2-212ENST00000540491 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
SOD2-212ENST00000540491 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
SOD2-212ENST00000540491 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
SOD2-212ENST00000540491 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
SOD2-212ENST00000540491 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
SOD2-212ENST00000540491 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
SOD2-212ENST00000540491 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SOD2-212ENST00000540491 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SOD2-212ENST00000540491 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
SOD2-212ENST00000540491 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
SOD2-212ENST00000540491 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
SOD2-212ENST00000540491 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
SOD2-212ENST00000540491 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
SOD2-212ENST00000540491 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SOD2-212ENST00000540491 H3BS24 57 aa3.9□□□□□ -1.79
SOD2-212ENST00000540491 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SOD2-212ENST00000540491 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
SOD2-212ENST00000540491 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
SOD2-212ENST00000540491 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
SOD2-212ENST00000540491 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
SOD2-212ENST00000540491 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
SOD2-212ENST00000540491 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
SOD2-212ENST00000540491 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
SOD2-212ENST00000540491 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
SOD2-212ENST00000540491 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
SOD2-212ENST00000540491 PRM1P04553 51 aa2.69□□□□□ -1.98
SOD2-212ENST00000540491 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
SOD2-212ENST00000540491 INE1O15225 51 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms