RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
C1R-206ENST00000540394 MT1EP04732 61 aa4.15□□□□□ -1.75
C1R-206ENST00000540394 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
C1R-206ENST00000540394 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
C1R-206ENST00000540394 MT1LQ93083 61 aa4.06□□□□□ -1.76
C1R-206ENST00000540394 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
C1R-206ENST00000540394 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
C1R-206ENST00000540394 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
C1R-206ENST00000540394 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
C1R-206ENST00000540394 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
C1R-206ENST00000540394 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
C1R-206ENST00000540394 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
C1R-206ENST00000540394 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
C1R-206ENST00000540394 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
C1R-206ENST00000540394 MT1MQ8N339 61 aa3.91□□□□□ -1.78
C1R-206ENST00000540394 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
C1R-206ENST00000540394 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
C1R-206ENST00000540394 MT1GP13640 62 aa3.88□□□□□ -1.79
C1R-206ENST00000540394 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
C1R-206ENST00000540394 SPRR2EP22531 72 aa3.84□□□□□ -1.79
C1R-206ENST00000540394 SPRR2BP35325 72 aa3.84□□□□□ -1.79
C1R-206ENST00000540394 SPRR2AP35326 72 aa3.84□□□□□ -1.79
C1R-206ENST00000540394 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.8
C1R-206ENST00000540394 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
C1R-206ENST00000540394 NEBP20929 6669 aa3.8□□□□□ -1.8
C1R-206ENST00000540394 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
C1R-206ENST00000540394 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
C1R-206ENST00000540394 SPRR2DP22532 72 aa3.69□□□□□ -1.82
C1R-206ENST00000540394 LCE1DQ5T752 114 aa3.65□□□□□ -1.82
C1R-206ENST00000540394 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
C1R-206ENST00000540394 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
C1R-206ENST00000540394 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
C1R-206ENST00000540394 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
C1R-206ENST00000540394 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
C1R-206ENST00000540394 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
C1R-206ENST00000540394 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
C1R-206ENST00000540394 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
C1R-206ENST00000540394 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
C1R-206ENST00000540394 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
C1R-206ENST00000540394 MT1AP04731 61 aa3.4□□□□□ -1.87
C1R-206ENST00000540394 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
C1R-206ENST00000540394 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
C1R-206ENST00000540394 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
C1R-206ENST00000540394 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
C1R-206ENST00000540394 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
C1R-206ENST00000540394 PRM1P04553 51 aa3.3□□□□□ -1.88
C1R-206ENST00000540394 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
C1R-206ENST00000540394 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
C1R-206ENST00000540394 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
C1R-206ENST00000540394 MT4P47944 62 aa3.27□□□□□ -1.89
C1R-206ENST00000540394 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
C1R-206ENST00000540394 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
C1R-206ENST00000540394 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
C1R-206ENST00000540394 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
C1R-206ENST00000540394 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
C1R-206ENST00000540394 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
C1R-206ENST00000540394 MT3P25713 68 aa3.03□□□□□ -1.92
C1R-206ENST00000540394 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
C1R-206ENST00000540394 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
C1R-206ENST00000540394 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
C1R-206ENST00000540394 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
C1R-206ENST00000540394 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
C1R-206ENST00000540394 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
C1R-206ENST00000540394 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
C1R-206ENST00000540394 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
C1R-206ENST00000540394 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
C1R-206ENST00000540394 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
C1R-206ENST00000540394 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
C1R-206ENST00000540394 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
C1R-206ENST00000540394 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
C1R-206ENST00000540394 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
C1R-206ENST00000540394 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
C1R-206ENST00000540394 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
C1R-206ENST00000540394 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
C1R-206ENST00000540394 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
C1R-206ENST00000540394 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
C1R-206ENST00000540394 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
C1R-206ENST00000540394 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 97.7 ms