RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
UBC-207ENST00000540351 MT1MQ8N339 61 aa4.64□□□□□ -1.67
UBC-207ENST00000540351 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
UBC-207ENST00000540351 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
UBC-207ENST00000540351 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
UBC-207ENST00000540351 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
UBC-207ENST00000540351 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
UBC-207ENST00000540351 MT1LQ93083 61 aa4.55□□□□□ -1.68
UBC-207ENST00000540351 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
UBC-207ENST00000540351 A8MU10 97 aa4.53□□□□□ -1.68
UBC-207ENST00000540351 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
UBC-207ENST00000540351 UQCR11O14957 56 aa4.5□□□□□ -1.69
UBC-207ENST00000540351 V9GYY9 64 aa4.46□□□□□ -1.7
UBC-207ENST00000540351 TNP1P09430 55 aa4.42□□□□□ -1.7
UBC-207ENST00000540351 PCP4P48539 62 aa4.39□□□□□ -1.71
UBC-207ENST00000540351 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
UBC-207ENST00000540351 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
UBC-207ENST00000540351 K7ERS5 55 aa4.38□□□□□ -1.71
UBC-207ENST00000540351 Q1T7F1 81 aa4.37□□□□□ -1.71
UBC-207ENST00000540351 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
UBC-207ENST00000540351 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
UBC-207ENST00000540351 PSPHP1O15172 72 aa4.34□□□□□ -1.71
UBC-207ENST00000540351 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
UBC-207ENST00000540351 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
UBC-207ENST00000540351 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
UBC-207ENST00000540351 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
UBC-207ENST00000540351 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
UBC-207ENST00000540351 A6NED7 52 aa4.25□□□□□ -1.73
UBC-207ENST00000540351 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
UBC-207ENST00000540351 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
UBC-207ENST00000540351 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
UBC-207ENST00000540351 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
UBC-207ENST00000540351 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
UBC-207ENST00000540351 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
UBC-207ENST00000540351 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
UBC-207ENST00000540351 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
UBC-207ENST00000540351 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
UBC-207ENST00000540351 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
UBC-207ENST00000540351 ROMO1P60602 79 aa4.02□□□□□ -1.77
UBC-207ENST00000540351 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
UBC-207ENST00000540351 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.77
UBC-207ENST00000540351 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
UBC-207ENST00000540351 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
UBC-207ENST00000540351 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
UBC-207ENST00000540351 MT1AP04731 61 aa3.84□□□□□ -1.79
UBC-207ENST00000540351 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
UBC-207ENST00000540351 H3BS24 57 aa3.81□□□□□ -1.8
UBC-207ENST00000540351 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
UBC-207ENST00000540351 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
UBC-207ENST00000540351 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
UBC-207ENST00000540351 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
UBC-207ENST00000540351 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
UBC-207ENST00000540351 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
UBC-207ENST00000540351 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
UBC-207ENST00000540351 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
UBC-207ENST00000540351 MT3P25713 68 aa3.49□□□□□ -1.85
UBC-207ENST00000540351 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
UBC-207ENST00000540351 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
UBC-207ENST00000540351 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
UBC-207ENST00000540351 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
UBC-207ENST00000540351 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
UBC-207ENST00000540351 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
UBC-207ENST00000540351 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
UBC-207ENST00000540351 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
UBC-207ENST00000540351 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
UBC-207ENST00000540351 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
UBC-207ENST00000540351 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
UBC-207ENST00000540351 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
UBC-207ENST00000540351 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
UBC-207ENST00000540351 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
UBC-207ENST00000540351 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
UBC-207ENST00000540351 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
UBC-207ENST00000540351 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
UBC-207ENST00000540351 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
UBC-207ENST00000540351 INE1O15225 51 aa2.31□□□□□ -2.04
UBC-207ENST00000540351 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
UBC-207ENST00000540351 PRM1P04553 51 aa2.04□□□□□ -2.08
UBC-207ENST00000540351 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms