RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 MT1HP80294 61 aa2.9□□□□□ -1.95
PPFIBP1-211ENST00000540256 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
PPFIBP1-211ENST00000540256 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
PPFIBP1-211ENST00000540256 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
PPFIBP1-211ENST00000540256 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
PPFIBP1-211ENST00000540256 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
PPFIBP1-211ENST00000540256 MT2AP02795 61 aa2.78□□□□□ -1.96
PPFIBP1-211ENST00000540256 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
PPFIBP1-211ENST00000540256 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
PPFIBP1-211ENST00000540256 MT1FP04733 61 aa2.75□□□□□ -1.97
PPFIBP1-211ENST00000540256 MT1XP80297 61 aa2.75□□□□□ -1.97
PPFIBP1-211ENST00000540256 MT1BP07438 61 aa2.74□□□□□ -1.97
PPFIBP1-211ENST00000540256 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
PPFIBP1-211ENST00000540256 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
PPFIBP1-211ENST00000540256 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
PPFIBP1-211ENST00000540256 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
PPFIBP1-211ENST00000540256 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
PPFIBP1-211ENST00000540256 USH2AO75445 5202 aa2.57□□□□□ -2
PPFIBP1-211ENST00000540256 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
PPFIBP1-211ENST00000540256 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
PPFIBP1-211ENST00000540256 SSPOA2VEC9 5147 aa2.53□□□□□ -2
PPFIBP1-211ENST00000540256 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
PPFIBP1-211ENST00000540256 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
PPFIBP1-211ENST00000540256 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
PPFIBP1-211ENST00000540256 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
PPFIBP1-211ENST00000540256 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
PPFIBP1-211ENST00000540256 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
PPFIBP1-211ENST00000540256 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PPFIBP1-211ENST00000540256 MT1LQ93083 61 aa2.41□□□□□ -2.02
PPFIBP1-211ENST00000540256 MT1EP04732 61 aa2.4□□□□□ -2.03
PPFIBP1-211ENST00000540256 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
PPFIBP1-211ENST00000540256 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
PPFIBP1-211ENST00000540256 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
PPFIBP1-211ENST00000540256 MT1GP13640 62 aa2.26□□□□□ -2.05
PPFIBP1-211ENST00000540256 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
PPFIBP1-211ENST00000540256 KMT2DO14686 5537 aa2.25□□□□□ -2.05
PPFIBP1-211ENST00000540256 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
PPFIBP1-211ENST00000540256 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
PPFIBP1-211ENST00000540256 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
PPFIBP1-211ENST00000540256 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.05
PPFIBP1-211ENST00000540256 MT1AP04731 61 aa2.21□□□□□ -2.06
PPFIBP1-211ENST00000540256 MT1MQ8N339 61 aa2.21□□□□□ -2.06
PPFIBP1-211ENST00000540256 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
PPFIBP1-211ENST00000540256 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
PPFIBP1-211ENST00000540256 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
PPFIBP1-211ENST00000540256 SPRR2EP22531 72 aa2.15□□□□□ -2.07
PPFIBP1-211ENST00000540256 SPRR2BP35325 72 aa2.15□□□□□ -2.07
PPFIBP1-211ENST00000540256 SPRR2AP35326 72 aa2.15□□□□□ -2.07
PPFIBP1-211ENST00000540256 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
PPFIBP1-211ENST00000540256 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
PPFIBP1-211ENST00000540256 NEBP20929 6669 aa2.09□□□□□ -2.08
PPFIBP1-211ENST00000540256 SPRR2DP22532 72 aa2.08□□□□□ -2.08
PPFIBP1-211ENST00000540256 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
PPFIBP1-211ENST00000540256 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
PPFIBP1-211ENST00000540256 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
PPFIBP1-211ENST00000540256 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
PPFIBP1-211ENST00000540256 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
PPFIBP1-211ENST00000540256 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
PPFIBP1-211ENST00000540256 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
PPFIBP1-211ENST00000540256 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
PPFIBP1-211ENST00000540256 PRM1P04553 51 aa1.95□□□□□ -2.1
PPFIBP1-211ENST00000540256 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
PPFIBP1-211ENST00000540256 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
PPFIBP1-211ENST00000540256 MT4P47944 62 aa1.75□□□□□ -2.13
PPFIBP1-211ENST00000540256 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
PPFIBP1-211ENST00000540256 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
PPFIBP1-211ENST00000540256 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
PPFIBP1-211ENST00000540256 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
PPFIBP1-211ENST00000540256 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
PPFIBP1-211ENST00000540256 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
PPFIBP1-211ENST00000540256 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
PPFIBP1-211ENST00000540256 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
PPFIBP1-211ENST00000540256 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
PPFIBP1-211ENST00000540256 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
PPFIBP1-211ENST00000540256 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
PPFIBP1-211ENST00000540256 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
PPFIBP1-211ENST00000540256 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
PPFIBP1-211ENST00000540256 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 140.7 ms