RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
NEK2-205ENST00000540251 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
NEK2-205ENST00000540251 MT1LQ93083 61 aa6.59□□□□□ -1.35
NEK2-205ENST00000540251 MT1GP13640 62 aa6.58□□□□□ -1.36
NEK2-205ENST00000540251 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
NEK2-205ENST00000540251 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
NEK2-205ENST00000540251 SPRR2DP22532 72 aa6.52□□□□□ -1.37
NEK2-205ENST00000540251 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
NEK2-205ENST00000540251 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
NEK2-205ENST00000540251 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
NEK2-205ENST00000540251 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
NEK2-205ENST00000540251 MT1MQ8N339 61 aa6.44□□□□□ -1.38
NEK2-205ENST00000540251 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
NEK2-205ENST00000540251 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
NEK2-205ENST00000540251 KRTAP2-2Q9BYT5 123 aa6.3□□□□□ -1.4
NEK2-205ENST00000540251 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
NEK2-205ENST00000540251 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
NEK2-205ENST00000540251 H3BS24 57 aa6.23□□□□□ -1.41
NEK2-205ENST00000540251 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
NEK2-205ENST00000540251 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
NEK2-205ENST00000540251 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
NEK2-205ENST00000540251 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
NEK2-205ENST00000540251 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
NEK2-205ENST00000540251 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
NEK2-205ENST00000540251 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
NEK2-205ENST00000540251 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
NEK2-205ENST00000540251 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
NEK2-205ENST00000540251 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
NEK2-205ENST00000540251 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
NEK2-205ENST00000540251 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
NEK2-205ENST00000540251 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
NEK2-205ENST00000540251 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
NEK2-205ENST00000540251 MT1AP04731 61 aa5.63□□□□□ -1.51
NEK2-205ENST00000540251 MT4P47944 62 aa5.63□□□□□ -1.51
NEK2-205ENST00000540251 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
NEK2-205ENST00000540251 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
NEK2-205ENST00000540251 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
NEK2-205ENST00000540251 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
NEK2-205ENST00000540251 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
NEK2-205ENST00000540251 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
NEK2-205ENST00000540251 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
NEK2-205ENST00000540251 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
NEK2-205ENST00000540251 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
NEK2-205ENST00000540251 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
NEK2-205ENST00000540251 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
NEK2-205ENST00000540251 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
NEK2-205ENST00000540251 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
NEK2-205ENST00000540251 MT3P25713 68 aa5.12□□□□□ -1.59
NEK2-205ENST00000540251 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
NEK2-205ENST00000540251 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
NEK2-205ENST00000540251 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
NEK2-205ENST00000540251 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
NEK2-205ENST00000540251 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
NEK2-205ENST00000540251 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
NEK2-205ENST00000540251 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
NEK2-205ENST00000540251 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
NEK2-205ENST00000540251 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
NEK2-205ENST00000540251 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
NEK2-205ENST00000540251 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
NEK2-205ENST00000540251 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
NEK2-205ENST00000540251 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
NEK2-205ENST00000540251 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
NEK2-205ENST00000540251 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
NEK2-205ENST00000540251 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
NEK2-205ENST00000540251 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
NEK2-205ENST00000540251 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
NEK2-205ENST00000540251 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
NEK2-205ENST00000540251 INE1O15225 51 aa3.85□□□□□ -1.79
NEK2-205ENST00000540251 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
NEK2-205ENST00000540251 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
NEK2-205ENST00000540251 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
NEK2-205ENST00000540251 PRM1P04553 51 aa3.52□□□□□ -1.85
NEK2-205ENST00000540251 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
NEK2-205ENST00000540251 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
NEK2-205ENST00000540251 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
NEK2-205ENST00000540251 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
NEK2-205ENST00000540251 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 105.7 ms