RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
LPCAT3-209ENST00000540060 A8MU10 97 aa2.8□□□□□ -1.96
LPCAT3-209ENST00000540060 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
LPCAT3-209ENST00000540060 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
LPCAT3-209ENST00000540060 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
LPCAT3-209ENST00000540060 Q1T7F1 81 aa2.78□□□□□ -1.96
LPCAT3-209ENST00000540060 UQCR11O14957 56 aa2.77□□□□□ -1.97
LPCAT3-209ENST00000540060 V9GYY9 64 aa2.77□□□□□ -1.97
LPCAT3-209ENST00000540060 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
LPCAT3-209ENST00000540060 KRTAP8-1Q8IUC2 63 aa2.75□□□□□ -1.97
LPCAT3-209ENST00000540060 NEBP20929 6669 aa2.74□□□□□ -1.97
LPCAT3-209ENST00000540060 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
LPCAT3-209ENST00000540060 PSPHP1O15172 72 aa2.74□□□□□ -1.97
LPCAT3-209ENST00000540060 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
LPCAT3-209ENST00000540060 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
LPCAT3-209ENST00000540060 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
LPCAT3-209ENST00000540060 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
LPCAT3-209ENST00000540060 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
LPCAT3-209ENST00000540060 A6NED7 52 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 SPRR2EP22531 72 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 SPRR2BP35325 72 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 SPRR2AP35326 72 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
LPCAT3-209ENST00000540060 MT3P25713 68 aa2.64□□□□□ -1.99
LPCAT3-209ENST00000540060 TNP1P09430 55 aa2.63□□□□□ -1.99
LPCAT3-209ENST00000540060 K7ERS5 55 aa2.62□□□□□ -1.99
LPCAT3-209ENST00000540060 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
LPCAT3-209ENST00000540060 MT1EP04732 61 aa2.59□□□□□ -1.99
LPCAT3-209ENST00000540060 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
LPCAT3-209ENST00000540060 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
LPCAT3-209ENST00000540060 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
LPCAT3-209ENST00000540060 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
LPCAT3-209ENST00000540060 CDC42SE1Q9NRR8 79 aa2.58□□□□□ -2
LPCAT3-209ENST00000540060 PMAIP1Q13794 54 aa2.57□□□□□ -2
LPCAT3-209ENST00000540060 SPRR2DP22532 72 aa2.56□□□□□ -2
LPCAT3-209ENST00000540060 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
LPCAT3-209ENST00000540060 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
LPCAT3-209ENST00000540060 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
LPCAT3-209ENST00000540060 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
LPCAT3-209ENST00000540060 MT1LQ93083 61 aa2.5□□□□□ -2.01
LPCAT3-209ENST00000540060 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
LPCAT3-209ENST00000540060 ROMO1P60602 79 aa2.49□□□□□ -2.01
LPCAT3-209ENST00000540060 MT1GP13640 62 aa2.48□□□□□ -2.01
LPCAT3-209ENST00000540060 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
LPCAT3-209ENST00000540060 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
LPCAT3-209ENST00000540060 MT1MQ8N339 61 aa2.46□□□□□ -2.02
LPCAT3-209ENST00000540060 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
LPCAT3-209ENST00000540060 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
LPCAT3-209ENST00000540060 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
LPCAT3-209ENST00000540060 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
LPCAT3-209ENST00000540060 MT4P47944 62 aa2.22□□□□□ -2.05
LPCAT3-209ENST00000540060 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
LPCAT3-209ENST00000540060 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
LPCAT3-209ENST00000540060 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
LPCAT3-209ENST00000540060 MT1AP04731 61 aa2.13□□□□□ -2.07
LPCAT3-209ENST00000540060 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
LPCAT3-209ENST00000540060 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
LPCAT3-209ENST00000540060 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
LPCAT3-209ENST00000540060 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
LPCAT3-209ENST00000540060 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
LPCAT3-209ENST00000540060 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
LPCAT3-209ENST00000540060 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
LPCAT3-209ENST00000540060 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
LPCAT3-209ENST00000540060 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
LPCAT3-209ENST00000540060 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
LPCAT3-209ENST00000540060 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
LPCAT3-209ENST00000540060 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
LPCAT3-209ENST00000540060 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
LPCAT3-209ENST00000540060 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
LPCAT3-209ENST00000540060 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
LPCAT3-209ENST00000540060 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
LPCAT3-209ENST00000540060 INE1O15225 51 aa1.71□□□□□ -2.14
LPCAT3-209ENST00000540060 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
LPCAT3-209ENST00000540060 PRM1P04553 51 aa1.28□□□□□ -2.2
LPCAT3-209ENST00000540060 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
LPCAT3-209ENST00000540060 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
LPCAT3-209ENST00000540060 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 159.9 ms