RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PCP4P48539 62 aa6.51□□□□□ -1.37
SNRPA1-203ENST00000540017 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
SNRPA1-203ENST00000540017 MT1MQ8N339 61 aa6.47□□□□□ -1.37
SNRPA1-203ENST00000540017 K7ERS5 55 aa6.45□□□□□ -1.38
SNRPA1-203ENST00000540017 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
SNRPA1-203ENST00000540017 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-203ENST00000540017 A6NED7 52 aa6.4□□□□□ -1.38
SNRPA1-203ENST00000540017 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
SNRPA1-203ENST00000540017 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SNRPA1-203ENST00000540017 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
SNRPA1-203ENST00000540017 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
SNRPA1-203ENST00000540017 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
SNRPA1-203ENST00000540017 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
SNRPA1-203ENST00000540017 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
SNRPA1-203ENST00000540017 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
SNRPA1-203ENST00000540017 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
SNRPA1-203ENST00000540017 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
SNRPA1-203ENST00000540017 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
SNRPA1-203ENST00000540017 ROMO1P60602 79 aa6.1□□□□□ -1.43
SNRPA1-203ENST00000540017 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
SNRPA1-203ENST00000540017 MT4P47944 62 aa6.05□□□□□ -1.44
SNRPA1-203ENST00000540017 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
SNRPA1-203ENST00000540017 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
SNRPA1-203ENST00000540017 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
SNRPA1-203ENST00000540017 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
SNRPA1-203ENST00000540017 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
SNRPA1-203ENST00000540017 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
SNRPA1-203ENST00000540017 H3BS24 57 aa5.82□□□□□ -1.48
SNRPA1-203ENST00000540017 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SNRPA1-203ENST00000540017 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
SNRPA1-203ENST00000540017 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
SNRPA1-203ENST00000540017 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
SNRPA1-203ENST00000540017 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
SNRPA1-203ENST00000540017 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
SNRPA1-203ENST00000540017 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SNRPA1-203ENST00000540017 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
SNRPA1-203ENST00000540017 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
SNRPA1-203ENST00000540017 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
SNRPA1-203ENST00000540017 MT1AP04731 61 aa5.55□□□□□ -1.52
SNRPA1-203ENST00000540017 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
SNRPA1-203ENST00000540017 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
SNRPA1-203ENST00000540017 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
SNRPA1-203ENST00000540017 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SNRPA1-203ENST00000540017 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
SNRPA1-203ENST00000540017 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
SNRPA1-203ENST00000540017 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
SNRPA1-203ENST00000540017 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
SNRPA1-203ENST00000540017 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
SNRPA1-203ENST00000540017 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
SNRPA1-203ENST00000540017 MT3P25713 68 aa5.05□□□□□ -1.6
SNRPA1-203ENST00000540017 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
SNRPA1-203ENST00000540017 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
SNRPA1-203ENST00000540017 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SNRPA1-203ENST00000540017 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
SNRPA1-203ENST00000540017 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
SNRPA1-203ENST00000540017 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
SNRPA1-203ENST00000540017 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SNRPA1-203ENST00000540017 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
SNRPA1-203ENST00000540017 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SNRPA1-203ENST00000540017 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
SNRPA1-203ENST00000540017 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
SNRPA1-203ENST00000540017 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
SNRPA1-203ENST00000540017 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
SNRPA1-203ENST00000540017 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
SNRPA1-203ENST00000540017 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
SNRPA1-203ENST00000540017 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
SNRPA1-203ENST00000540017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SNRPA1-203ENST00000540017 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
SNRPA1-203ENST00000540017 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SNRPA1-203ENST00000540017 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
SNRPA1-203ENST00000540017 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
SNRPA1-203ENST00000540017 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
SNRPA1-203ENST00000540017 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SNRPA1-203ENST00000540017 PRM1P04553 51 aa3.15□□□□□ -1.91
SNRPA1-203ENST00000540017 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
SNRPA1-203ENST00000540017 INE1O15225 51 aa2.82□□□□□ -1.96
SNRPA1-203ENST00000540017 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
SNRPA1-203ENST00000540017 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 65.2 ms