RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
LDHB-208ENST00000539782 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
LDHB-208ENST00000539782 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
LDHB-208ENST00000539782 SNURFQ9Y675 71 aa2.51□□□□□ -2.01
LDHB-208ENST00000539782 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
LDHB-208ENST00000539782 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
LDHB-208ENST00000539782 SPANXA2-OT1Q8N9U9 137 aa2.5□□□□□ -2.01
LDHB-208ENST00000539782 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
LDHB-208ENST00000539782 A0A1B0GV90 55 aa2.47□□□□□ -2.01
LDHB-208ENST00000539782 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
LDHB-208ENST00000539782 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
LDHB-208ENST00000539782 A0A1B0GU33 70 aa2.46□□□□□ -2.02
LDHB-208ENST00000539782 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
LDHB-208ENST00000539782 COA5Q86WW8 74 aa2.46□□□□□ -2.02
LDHB-208ENST00000539782 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
LDHB-208ENST00000539782 TNP1P09430 55 aa2.44□□□□□ -2.02
LDHB-208ENST00000539782 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
LDHB-208ENST00000539782 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
LDHB-208ENST00000539782 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
LDHB-208ENST00000539782 SERP2Q8N6R1 65 aa2.38□□□□□ -2.03
LDHB-208ENST00000539782 A8MU10 97 aa2.37□□□□□ -2.03
LDHB-208ENST00000539782 A0A1B0GU69 56 aa2.36□□□□□ -2.03
LDHB-208ENST00000539782 K7ERU9 68 aa2.36□□□□□ -2.03
LDHB-208ENST00000539782 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
LDHB-208ENST00000539782 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
LDHB-208ENST00000539782 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
LDHB-208ENST00000539782 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
LDHB-208ENST00000539782 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
LDHB-208ENST00000539782 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
LDHB-208ENST00000539782 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
LDHB-208ENST00000539782 H7BZZ5 65 aa2.24□□□□□ -2.05
LDHB-208ENST00000539782 COX7CP15954 63 aa2.24□□□□□ -2.05
LDHB-208ENST00000539782 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
LDHB-208ENST00000539782 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
LDHB-208ENST00000539782 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
LDHB-208ENST00000539782 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
LDHB-208ENST00000539782 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
LDHB-208ENST00000539782 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
LDHB-208ENST00000539782 MT1AP04731 61 aa2.16□□□□□ -2.06
LDHB-208ENST00000539782 UQCR11O14957 56 aa2.15□□□□□ -2.07
LDHB-208ENST00000539782 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
LDHB-208ENST00000539782 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.07
LDHB-208ENST00000539782 K7ERS5 55 aa2.13□□□□□ -2.07
LDHB-208ENST00000539782 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
LDHB-208ENST00000539782 V9GYY9 64 aa2.12□□□□□ -2.07
LDHB-208ENST00000539782 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
LDHB-208ENST00000539782 ATP5EP56381 51 aaPredicted RBP2.1□□□□□ -2.07
LDHB-208ENST00000539782 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
LDHB-208ENST00000539782 ANAPC13Q9BS18 74 aa2.09□□□□□ -2.07
LDHB-208ENST00000539782 MIR22HGQ0VDD5 57 aa2.08□□□□□ -2.08
LDHB-208ENST00000539782 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
LDHB-208ENST00000539782 CCDC179H3BU77 68 aa2.02□□□□□ -2.09
LDHB-208ENST00000539782 PSPHP1O15172 72 aa2.01□□□□□ -2.09
LDHB-208ENST00000539782 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
LDHB-208ENST00000539782 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
LDHB-208ENST00000539782 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
LDHB-208ENST00000539782 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
LDHB-208ENST00000539782 CDC42SE1Q9NRR8 79 aa1.97□□□□□ -2.09
LDHB-208ENST00000539782 TMEM258P61165 79 aa1.96□□□□□ -2.1
LDHB-208ENST00000539782 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
LDHB-208ENST00000539782 Q1T7F1 81 aa1.91□□□□□ -2.1
LDHB-208ENST00000539782 ROMO1P60602 79 aa1.9□□□□□ -2.11
LDHB-208ENST00000539782 A6NED7 52 aa1.88□□□□□ -2.11
LDHB-208ENST00000539782 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
LDHB-208ENST00000539782 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
LDHB-208ENST00000539782 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
LDHB-208ENST00000539782 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
LDHB-208ENST00000539782 PMAIP1Q13794 54 aa1.63□□□□□ -2.15
LDHB-208ENST00000539782 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
LDHB-208ENST00000539782 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.16
LDHB-208ENST00000539782 KTN1-AS1Q86SY8 53 aa1.51□□□□□ -2.17
LDHB-208ENST00000539782 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
LDHB-208ENST00000539782 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
LDHB-208ENST00000539782 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
LDHB-208ENST00000539782 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
LDHB-208ENST00000539782 INE1O15225 51 aa1.15□□□□□ -2.23
LDHB-208ENST00000539782 PRM1P04553 51 aa0.96□□□□□ -2.26
LDHB-208ENST00000539782 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms