RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 KMT2DO14686 5537 aa4.27□□□□□ -1.73
VTN-202ENST00000539746 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
VTN-202ENST00000539746 MT1GP13640 62 aa4.23□□□□□ -1.73
VTN-202ENST00000539746 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
VTN-202ENST00000539746 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
VTN-202ENST00000539746 MT1LQ93083 61 aa4.19□□□□□ -1.74
VTN-202ENST00000539746 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
VTN-202ENST00000539746 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
VTN-202ENST00000539746 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
VTN-202ENST00000539746 SPRR2EP22531 72 aa4.14□□□□□ -1.75
VTN-202ENST00000539746 SPRR2BP35325 72 aa4.14□□□□□ -1.75
VTN-202ENST00000539746 SPRR2AP35326 72 aa4.14□□□□□ -1.75
VTN-202ENST00000539746 NEBP20929 6669 aa4.14□□□□□ -1.75
VTN-202ENST00000539746 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
VTN-202ENST00000539746 H3BS24 57 aa4.08□□□□□ -1.76
VTN-202ENST00000539746 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
VTN-202ENST00000539746 MT1MQ8N339 61 aa4.04□□□□□ -1.76
VTN-202ENST00000539746 SPRR2DP22532 72 aa4.02□□□□□ -1.77
VTN-202ENST00000539746 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
VTN-202ENST00000539746 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
VTN-202ENST00000539746 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
VTN-202ENST00000539746 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
VTN-202ENST00000539746 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
VTN-202ENST00000539746 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
VTN-202ENST00000539746 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
VTN-202ENST00000539746 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
VTN-202ENST00000539746 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
VTN-202ENST00000539746 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
VTN-202ENST00000539746 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
VTN-202ENST00000539746 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
VTN-202ENST00000539746 INE1O15225 51 aa3.63□□□□□ -1.83
VTN-202ENST00000539746 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
VTN-202ENST00000539746 MT1AP04731 61 aa3.62□□□□□ -1.83
VTN-202ENST00000539746 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
VTN-202ENST00000539746 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
VTN-202ENST00000539746 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
VTN-202ENST00000539746 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
VTN-202ENST00000539746 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
VTN-202ENST00000539746 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
VTN-202ENST00000539746 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
VTN-202ENST00000539746 MT4P47944 62 aa3.38□□□□□ -1.87
VTN-202ENST00000539746 MT3P25713 68 aa3.37□□□□□ -1.87
VTN-202ENST00000539746 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
VTN-202ENST00000539746 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
VTN-202ENST00000539746 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
VTN-202ENST00000539746 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
VTN-202ENST00000539746 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
VTN-202ENST00000539746 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
VTN-202ENST00000539746 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
VTN-202ENST00000539746 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
VTN-202ENST00000539746 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
VTN-202ENST00000539746 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VTN-202ENST00000539746 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
VTN-202ENST00000539746 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
VTN-202ENST00000539746 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
VTN-202ENST00000539746 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
VTN-202ENST00000539746 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
VTN-202ENST00000539746 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
VTN-202ENST00000539746 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
VTN-202ENST00000539746 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
VTN-202ENST00000539746 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
VTN-202ENST00000539746 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
VTN-202ENST00000539746 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
VTN-202ENST00000539746 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
VTN-202ENST00000539746 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
VTN-202ENST00000539746 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
VTN-202ENST00000539746 PRM1P04553 51 aa2.62□□□□□ -1.99
VTN-202ENST00000539746 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
VTN-202ENST00000539746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
VTN-202ENST00000539746 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
VTN-202ENST00000539746 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
VTN-202ENST00000539746 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
VTN-202ENST00000539746 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
VTN-202ENST00000539746 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
VTN-202ENST00000539746 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
VTN-202ENST00000539746 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
VTN-202ENST00000539746 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
VTN-202ENST00000539746 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms