RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
TRAF3-204ENST00000539721 SPRR2EP22531 72 aa5.69□□□□□ -1.5
TRAF3-204ENST00000539721 SPRR2BP35325 72 aa5.69□□□□□ -1.5
TRAF3-204ENST00000539721 SPRR2AP35326 72 aa5.69□□□□□ -1.5
TRAF3-204ENST00000539721 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
TRAF3-204ENST00000539721 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
TRAF3-204ENST00000539721 MT1GP13640 62 aa5.65□□□□□ -1.5
TRAF3-204ENST00000539721 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
TRAF3-204ENST00000539721 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
TRAF3-204ENST00000539721 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
TRAF3-204ENST00000539721 MT1MQ8N339 61 aa5.58□□□□□ -1.52
TRAF3-204ENST00000539721 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
TRAF3-204ENST00000539721 NEBP20929 6669 aa5.5□□□□□ -1.53
TRAF3-204ENST00000539721 SPRR2DP22532 72 aa5.49□□□□□ -1.53
TRAF3-204ENST00000539721 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
TRAF3-204ENST00000539721 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
TRAF3-204ENST00000539721 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.56
TRAF3-204ENST00000539721 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.56
TRAF3-204ENST00000539721 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
TRAF3-204ENST00000539721 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
TRAF3-204ENST00000539721 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
TRAF3-204ENST00000539721 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
TRAF3-204ENST00000539721 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
TRAF3-204ENST00000539721 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
TRAF3-204ENST00000539721 LUZP6Q538Z0 58 aa5.15□□□□□ -1.58
TRAF3-204ENST00000539721 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
TRAF3-204ENST00000539721 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
TRAF3-204ENST00000539721 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
TRAF3-204ENST00000539721 MT1AP04731 61 aa4.91□□□□□ -1.62
TRAF3-204ENST00000539721 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
TRAF3-204ENST00000539721 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
TRAF3-204ENST00000539721 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
TRAF3-204ENST00000539721 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
TRAF3-204ENST00000539721 MT4P47944 62 aa4.76□□□□□ -1.65
TRAF3-204ENST00000539721 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
TRAF3-204ENST00000539721 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
TRAF3-204ENST00000539721 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
TRAF3-204ENST00000539721 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
TRAF3-204ENST00000539721 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
TRAF3-204ENST00000539721 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
TRAF3-204ENST00000539721 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
TRAF3-204ENST00000539721 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
TRAF3-204ENST00000539721 H3BS24 57 aa4.49□□□□□ -1.69
TRAF3-204ENST00000539721 MT3P25713 68 aa4.45□□□□□ -1.7
TRAF3-204ENST00000539721 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
TRAF3-204ENST00000539721 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
TRAF3-204ENST00000539721 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.7
TRAF3-204ENST00000539721 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
TRAF3-204ENST00000539721 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
TRAF3-204ENST00000539721 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
TRAF3-204ENST00000539721 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
TRAF3-204ENST00000539721 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.76
TRAF3-204ENST00000539721 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
TRAF3-204ENST00000539721 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
TRAF3-204ENST00000539721 INE1O15225 51 aa4.02□□□□□ -1.77
TRAF3-204ENST00000539721 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
TRAF3-204ENST00000539721 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
TRAF3-204ENST00000539721 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
TRAF3-204ENST00000539721 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
TRAF3-204ENST00000539721 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
TRAF3-204ENST00000539721 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
TRAF3-204ENST00000539721 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
TRAF3-204ENST00000539721 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
TRAF3-204ENST00000539721 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
TRAF3-204ENST00000539721 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
TRAF3-204ENST00000539721 PRM1P04553 51 aa3.44□□□□□ -1.86
TRAF3-204ENST00000539721 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
TRAF3-204ENST00000539721 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
TRAF3-204ENST00000539721 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
TRAF3-204ENST00000539721 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
TRAF3-204ENST00000539721 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
TRAF3-204ENST00000539721 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
TRAF3-204ENST00000539721 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TRAF3-204ENST00000539721 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
TRAF3-204ENST00000539721 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TRAF3-204ENST00000539721 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
TRAF3-204ENST00000539721 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 157 ms