RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
PACSIN3-211ENST00000539589 MT1LQ93083 61 aa7.12□□□□□ -1.27
PACSIN3-211ENST00000539589 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
PACSIN3-211ENST00000539589 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
PACSIN3-211ENST00000539589 KRTAP5-9P26371 169 aa7.01□□□□□ -1.29
PACSIN3-211ENST00000539589 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
PACSIN3-211ENST00000539589 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
PACSIN3-211ENST00000539589 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
PACSIN3-211ENST00000539589 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
PACSIN3-211ENST00000539589 MT1GP13640 62 aa6.87□□□□□ -1.31
PACSIN3-211ENST00000539589 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
PACSIN3-211ENST00000539589 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
PACSIN3-211ENST00000539589 MT1MQ8N339 61 aa6.84□□□□□ -1.31
PACSIN3-211ENST00000539589 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
PACSIN3-211ENST00000539589 KRTAP4-3Q9BYR4 195 aa6.79□□□□□ -1.32
PACSIN3-211ENST00000539589 SPRR2EP22531 72 aa6.72□□□□□ -1.33
PACSIN3-211ENST00000539589 SPRR2BP35325 72 aa6.72□□□□□ -1.33
PACSIN3-211ENST00000539589 SPRR2AP35326 72 aa6.72□□□□□ -1.33
PACSIN3-211ENST00000539589 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
PACSIN3-211ENST00000539589 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
PACSIN3-211ENST00000539589 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.36
PACSIN3-211ENST00000539589 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.36
PACSIN3-211ENST00000539589 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.36
PACSIN3-211ENST00000539589 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
PACSIN3-211ENST00000539589 INE1O15225 51 aa6.52□□□□□ -1.37
PACSIN3-211ENST00000539589 NEBP20929 6669 aa6.46□□□□□ -1.37
PACSIN3-211ENST00000539589 SPRR2DP22532 72 aa6.46□□□□□ -1.38
PACSIN3-211ENST00000539589 LCE3BQ5TA77 95 aa6.21□□□□□ -1.41
PACSIN3-211ENST00000539589 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
PACSIN3-211ENST00000539589 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
PACSIN3-211ENST00000539589 MT1AP04731 61 aa6.02□□□□□ -1.45
PACSIN3-211ENST00000539589 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
PACSIN3-211ENST00000539589 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
PACSIN3-211ENST00000539589 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
PACSIN3-211ENST00000539589 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
PACSIN3-211ENST00000539589 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
PACSIN3-211ENST00000539589 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
PACSIN3-211ENST00000539589 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
PACSIN3-211ENST00000539589 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
PACSIN3-211ENST00000539589 MT4P47944 62 aa5.65□□□□□ -1.51
PACSIN3-211ENST00000539589 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.51
PACSIN3-211ENST00000539589 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
PACSIN3-211ENST00000539589 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
PACSIN3-211ENST00000539589 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
PACSIN3-211ENST00000539589 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
PACSIN3-211ENST00000539589 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
PACSIN3-211ENST00000539589 LCE3EQ5T5B0 92 aa5.45□□□□□ -1.54
PACSIN3-211ENST00000539589 MT3P25713 68 aa5.45□□□□□ -1.54
PACSIN3-211ENST00000539589 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
PACSIN3-211ENST00000539589 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
PACSIN3-211ENST00000539589 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
PACSIN3-211ENST00000539589 PRM1P04553 51 aa4.98□□□□□ -1.61
PACSIN3-211ENST00000539589 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
PACSIN3-211ENST00000539589 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
PACSIN3-211ENST00000539589 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
PACSIN3-211ENST00000539589 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
PACSIN3-211ENST00000539589 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
PACSIN3-211ENST00000539589 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
PACSIN3-211ENST00000539589 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
PACSIN3-211ENST00000539589 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
PACSIN3-211ENST00000539589 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.69
PACSIN3-211ENST00000539589 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
PACSIN3-211ENST00000539589 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
PACSIN3-211ENST00000539589 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
PACSIN3-211ENST00000539589 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
PACSIN3-211ENST00000539589 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
PACSIN3-211ENST00000539589 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
PACSIN3-211ENST00000539589 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
PACSIN3-211ENST00000539589 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
PACSIN3-211ENST00000539589 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
PACSIN3-211ENST00000539589 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
PACSIN3-211ENST00000539589 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
PACSIN3-211ENST00000539589 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
PACSIN3-211ENST00000539589 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
PACSIN3-211ENST00000539589 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
PACSIN3-211ENST00000539589 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
PACSIN3-211ENST00000539589 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 103.5 ms