RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
FAM60A-206ENST00000539409 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
FAM60A-206ENST00000539409 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
FAM60A-206ENST00000539409 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
FAM60A-206ENST00000539409 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
FAM60A-206ENST00000539409 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
FAM60A-206ENST00000539409 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
FAM60A-206ENST00000539409 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
FAM60A-206ENST00000539409 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
FAM60A-206ENST00000539409 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
FAM60A-206ENST00000539409 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
FAM60A-206ENST00000539409 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
FAM60A-206ENST00000539409 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
FAM60A-206ENST00000539409 MT1EP04732 61 aa4.2□□□□□ -1.74
FAM60A-206ENST00000539409 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
FAM60A-206ENST00000539409 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
FAM60A-206ENST00000539409 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
FAM60A-206ENST00000539409 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.76
FAM60A-206ENST00000539409 MT1LQ93083 61 aa4.09□□□□□ -1.76
FAM60A-206ENST00000539409 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
FAM60A-206ENST00000539409 SPRR2EP22531 72 aa4.06□□□□□ -1.76
FAM60A-206ENST00000539409 SPRR2BP35325 72 aa4.06□□□□□ -1.76
FAM60A-206ENST00000539409 SPRR2AP35326 72 aa4.06□□□□□ -1.76
FAM60A-206ENST00000539409 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
FAM60A-206ENST00000539409 NEBP20929 6669 aa4.02□□□□□ -1.77
FAM60A-206ENST00000539409 MT1GP13640 62 aa4□□□□□ -1.77
FAM60A-206ENST00000539409 MT1MQ8N339 61 aa3.96□□□□□ -1.78
FAM60A-206ENST00000539409 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
FAM60A-206ENST00000539409 SPRR2DP22532 72 aa3.92□□□□□ -1.78
FAM60A-206ENST00000539409 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
FAM60A-206ENST00000539409 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
FAM60A-206ENST00000539409 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
FAM60A-206ENST00000539409 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
FAM60A-206ENST00000539409 INE1O15225 51 aa3.74□□□□□ -1.81
FAM60A-206ENST00000539409 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
FAM60A-206ENST00000539409 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
FAM60A-206ENST00000539409 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
FAM60A-206ENST00000539409 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
FAM60A-206ENST00000539409 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
FAM60A-206ENST00000539409 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
FAM60A-206ENST00000539409 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
FAM60A-206ENST00000539409 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
FAM60A-206ENST00000539409 MT1AP04731 61 aa3.47□□□□□ -1.85
FAM60A-206ENST00000539409 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
FAM60A-206ENST00000539409 MT4P47944 62 aa3.41□□□□□ -1.86
FAM60A-206ENST00000539409 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
FAM60A-206ENST00000539409 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
FAM60A-206ENST00000539409 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
FAM60A-206ENST00000539409 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
FAM60A-206ENST00000539409 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
FAM60A-206ENST00000539409 MT3P25713 68 aa3.24□□□□□ -1.89
FAM60A-206ENST00000539409 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
FAM60A-206ENST00000539409 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
FAM60A-206ENST00000539409 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
FAM60A-206ENST00000539409 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
FAM60A-206ENST00000539409 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
FAM60A-206ENST00000539409 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
FAM60A-206ENST00000539409 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
FAM60A-206ENST00000539409 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
FAM60A-206ENST00000539409 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
FAM60A-206ENST00000539409 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
FAM60A-206ENST00000539409 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
FAM60A-206ENST00000539409 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
FAM60A-206ENST00000539409 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
FAM60A-206ENST00000539409 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
FAM60A-206ENST00000539409 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
FAM60A-206ENST00000539409 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
FAM60A-206ENST00000539409 LCE1CQ5T751 118 aa2.59□□□□□ -2
FAM60A-206ENST00000539409 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
FAM60A-206ENST00000539409 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
FAM60A-206ENST00000539409 PRM1P04553 51 aa2.37□□□□□ -2.03
FAM60A-206ENST00000539409 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
FAM60A-206ENST00000539409 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
FAM60A-206ENST00000539409 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
FAM60A-206ENST00000539409 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
FAM60A-206ENST00000539409 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
FAM60A-206ENST00000539409 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms