RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
PDCD2-207ENST00000539212 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
PDCD2-207ENST00000539212 SERP1Q9Y6X1 66 aa6.13□□□□□ -1.43
PDCD2-207ENST00000539212 MT1LQ93083 61 aa6.12□□□□□ -1.43
PDCD2-207ENST00000539212 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
PDCD2-207ENST00000539212 SEC61GP60059 68 aa6.11□□□□□ -1.43
PDCD2-207ENST00000539212 A0A1B0GU33 70 aa6.09□□□□□ -1.43
PDCD2-207ENST00000539212 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
PDCD2-207ENST00000539212 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
PDCD2-207ENST00000539212 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
PDCD2-207ENST00000539212 A8MU10 97 aa5.97□□□□□ -1.45
PDCD2-207ENST00000539212 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
PDCD2-207ENST00000539212 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
PDCD2-207ENST00000539212 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
PDCD2-207ENST00000539212 H7BZZ5 65 aa5.87□□□□□ -1.47
PDCD2-207ENST00000539212 TNP1P09430 55 aa5.87□□□□□ -1.47
PDCD2-207ENST00000539212 A0A1B0GU69 56 aa5.86□□□□□ -1.47
PDCD2-207ENST00000539212 COX7CP15954 63 aa5.86□□□□□ -1.47
PDCD2-207ENST00000539212 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
PDCD2-207ENST00000539212 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
PDCD2-207ENST00000539212 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
PDCD2-207ENST00000539212 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
PDCD2-207ENST00000539212 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
PDCD2-207ENST00000539212 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
PDCD2-207ENST00000539212 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
PDCD2-207ENST00000539212 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
PDCD2-207ENST00000539212 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
PDCD2-207ENST00000539212 MT3P25713 68 aa5.51□□□□□ -1.53
PDCD2-207ENST00000539212 ANAPC13Q9BS18 74 aa5.5□□□□□ -1.53
PDCD2-207ENST00000539212 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
PDCD2-207ENST00000539212 CCDC179H3BU77 68 aa5.48□□□□□ -1.53
PDCD2-207ENST00000539212 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
PDCD2-207ENST00000539212 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
PDCD2-207ENST00000539212 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
PDCD2-207ENST00000539212 UQCR11O14957 56 aa5.37□□□□□ -1.55
PDCD2-207ENST00000539212 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
PDCD2-207ENST00000539212 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
PDCD2-207ENST00000539212 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
PDCD2-207ENST00000539212 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
PDCD2-207ENST00000539212 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
PDCD2-207ENST00000539212 MT1AP04731 61 aa5.19□□□□□ -1.58
PDCD2-207ENST00000539212 TMEM258P61165 79 aa5.16□□□□□ -1.58
PDCD2-207ENST00000539212 K7ERS5 55 aa5.14□□□□□ -1.59
PDCD2-207ENST00000539212 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
PDCD2-207ENST00000539212 KRTAP5-8O75690 187 aa5.11□□□□□ -1.59
PDCD2-207ENST00000539212 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
PDCD2-207ENST00000539212 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
PDCD2-207ENST00000539212 PSPHP1O15172 72 aa5.06□□□□□ -1.6
PDCD2-207ENST00000539212 LCE1FQ5T754 118 aa5.05□□□□□ -1.6
PDCD2-207ENST00000539212 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
PDCD2-207ENST00000539212 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
PDCD2-207ENST00000539212 Q1T7F1 81 aa4.89□□□□□ -1.63
PDCD2-207ENST00000539212 V9GYY9 64 aa4.89□□□□□ -1.63
PDCD2-207ENST00000539212 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
PDCD2-207ENST00000539212 A6NED7 52 aa4.83□□□□□ -1.64
PDCD2-207ENST00000539212 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
PDCD2-207ENST00000539212 ROMO1P60602 79 aa4.81□□□□□ -1.64
PDCD2-207ENST00000539212 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
PDCD2-207ENST00000539212 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PDCD2-207ENST00000539212 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
PDCD2-207ENST00000539212 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PDCD2-207ENST00000539212 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
PDCD2-207ENST00000539212 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
PDCD2-207ENST00000539212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PDCD2-207ENST00000539212 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
PDCD2-207ENST00000539212 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
PDCD2-207ENST00000539212 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
PDCD2-207ENST00000539212 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
PDCD2-207ENST00000539212 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
PDCD2-207ENST00000539212 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
PDCD2-207ENST00000539212 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
PDCD2-207ENST00000539212 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
PDCD2-207ENST00000539212 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
PDCD2-207ENST00000539212 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
PDCD2-207ENST00000539212 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
PDCD2-207ENST00000539212 PRM1P04553 51 aa2.49□□□□□ -2.01
PDCD2-207ENST00000539212 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
PDCD2-207ENST00000539212 INE1O15225 51 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms