RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 TNP1P09430 55 aa8.18□□□□□ -1.1
RAP1B-218ENST00000538877 COX7CP15954 63 aa8.18□□□□□ -1.1
RAP1B-218ENST00000538877 H7BZZ5 65 aa8.17□□□□□ -1.1
RAP1B-218ENST00000538877 KRTAP5-10Q6L8G5 202 aa8.16□□□□□ -1.1
RAP1B-218ENST00000538877 LOC100996750A0A140TA64 210 aa8.13□□□□□ -1.11
RAP1B-218ENST00000538877 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
RAP1B-218ENST00000538877 KRTAP12-3P60328 96 aa7.95□□□□□ -1.14
RAP1B-218ENST00000538877 KRTAP5-3Q6L8H2 238 aa7.9□□□□□ -1.14
RAP1B-218ENST00000538877 KRTAP5-7Q6L8G8 165 aa7.88□□□□□ -1.15
RAP1B-218ENST00000538877 KRTAP20-2Q3LI61 65 aa7.85□□□□□ -1.15
RAP1B-218ENST00000538877 PRR15LQ9BU68 103 aa7.81□□□□□ -1.16
RAP1B-218ENST00000538877 KRTAP5-5Q701N2 237 aaPredicted RBP7.8□□□□□ -1.16
RAP1B-218ENST00000538877 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
RAP1B-218ENST00000538877 H3BS24 57 aa7.73□□□□□ -1.17
RAP1B-218ENST00000538877 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
RAP1B-218ENST00000538877 KRTAP12-4P60329 112 aa7.68□□□□□ -1.18
RAP1B-218ENST00000538877 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
RAP1B-218ENST00000538877 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
RAP1B-218ENST00000538877 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
RAP1B-218ENST00000538877 UQCR11O14957 56 aa7.53□□□□□ -1.2
RAP1B-218ENST00000538877 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
RAP1B-218ENST00000538877 SYNE1Q8NF91 8797 aaKnown RBP7.52□□□□□ -1.21
RAP1B-218ENST00000538877 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
RAP1B-218ENST00000538877 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
RAP1B-218ENST00000538877 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
RAP1B-218ENST00000538877 K7ERS5 55 aa7.27□□□□□ -1.25
RAP1B-218ENST00000538877 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
RAP1B-218ENST00000538877 TMEM258P61165 79 aa7.24□□□□□ -1.25
RAP1B-218ENST00000538877 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
RAP1B-218ENST00000538877 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
RAP1B-218ENST00000538877 KRTAP5-2Q701N4 177 aa7.19□□□□□ -1.26
RAP1B-218ENST00000538877 MT1AP04731 61 aa7.16□□□□□ -1.26
RAP1B-218ENST00000538877 KRTAP6-1Q3LI64 71 aa7.16□□□□□ -1.26
RAP1B-218ENST00000538877 PSPHP1O15172 72 aa7.03□□□□□ -1.28
RAP1B-218ENST00000538877 PCP4P48539 62 aa7.03□□□□□ -1.28
RAP1B-218ENST00000538877 KRTAP5-8O75690 187 aa7.01□□□□□ -1.29
RAP1B-218ENST00000538877 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
RAP1B-218ENST00000538877 KRTAP9-4Q9BYQ2 154 aa6.95□□□□□ -1.3
RAP1B-218ENST00000538877 V9GYY9 64 aa6.92□□□□□ -1.3
RAP1B-218ENST00000538877 KRTAP6-2Q3LI66 62 aa6.91□□□□□ -1.3
RAP1B-218ENST00000538877 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
RAP1B-218ENST00000538877 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
RAP1B-218ENST00000538877 MUC5ACP98088 5654 aa6.85□□□□□ -1.31
RAP1B-218ENST00000538877 Q1T7F1 81 aa6.85□□□□□ -1.31
RAP1B-218ENST00000538877 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
RAP1B-218ENST00000538877 AHNAKQ09666 5890 aaKnown RBP6.83□□□□□ -1.32
RAP1B-218ENST00000538877 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
RAP1B-218ENST00000538877 MUC5BQ9HC84 5762 aaPredicted RBP6.79□□□□□ -1.32
RAP1B-218ENST00000538877 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
RAP1B-218ENST00000538877 A6NED7 52 aa6.75□□□□□ -1.33
RAP1B-218ENST00000538877 ROMO1P60602 79 aa6.7□□□□□ -1.34
RAP1B-218ENST00000538877 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
RAP1B-218ENST00000538877 MT3P25713 68 aa6.55□□□□□ -1.36
RAP1B-218ENST00000538877 KRTAP5-1Q6L8H4 278 aa6.51□□□□□ -1.37
RAP1B-218ENST00000538877 KRTAP4-2Q9BYR5 136 aa6.32□□□□□ -1.4
RAP1B-218ENST00000538877 LCE1EQ5T753 118 aa6.08□□□□□ -1.44
RAP1B-218ENST00000538877 LCE1BQ5T7P3 118 aa5.82□□□□□ -1.48
RAP1B-218ENST00000538877 LCE1CQ5T751 118 aa5.65□□□□□ -1.5
RAP1B-218ENST00000538877 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
RAP1B-218ENST00000538877 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
RAP1B-218ENST00000538877 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
RAP1B-218ENST00000538877 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
RAP1B-218ENST00000538877 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
RAP1B-218ENST00000538877 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
RAP1B-218ENST00000538877 PMAIP1Q13794 54 aa4.96□□□□□ -1.62
RAP1B-218ENST00000538877 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
RAP1B-218ENST00000538877 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
RAP1B-218ENST00000538877 PHGR1C9JFL3 82 aa4.79□□□□□ -1.64
RAP1B-218ENST00000538877 KRTAP21-2Q3LI59 83 aa4.71□□□□□ -1.66
RAP1B-218ENST00000538877 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
RAP1B-218ENST00000538877 KRTAP4-4Q9BYR3 166 aa4.41□□□□□ -1.7
RAP1B-218ENST00000538877 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
RAP1B-218ENST00000538877 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
RAP1B-218ENST00000538877 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
RAP1B-218ENST00000538877 KRTAP21-1Q3LI58 79 aa3.62□□□□□ -1.83
RAP1B-218ENST00000538877 PRM1P04553 51 aa3.43□□□□□ -1.86
RAP1B-218ENST00000538877 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
RAP1B-218ENST00000538877 INE1O15225 51 aa2.88□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 114.4 ms