RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
TMEM260-202ENST00000538838 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
TMEM260-202ENST00000538838 NEBP20929 6669 aa8.54□□□□□ -1.04
TMEM260-202ENST00000538838 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
TMEM260-202ENST00000538838 KRTAP19-3Q7Z4W3 81 aa8.43□□□□□ -1.06
TMEM260-202ENST00000538838 MT1LQ93083 61 aa8.4□□□□□ -1.06
TMEM260-202ENST00000538838 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
TMEM260-202ENST00000538838 SPRR2DP22532 72 aa8.29□□□□□ -1.08
TMEM260-202ENST00000538838 MT1GP13640 62 aa8.28□□□□□ -1.08
TMEM260-202ENST00000538838 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
TMEM260-202ENST00000538838 MT1MQ8N339 61 aa8.2□□□□□ -1.1
TMEM260-202ENST00000538838 KRTAP4-7Q9BYR0 210 aa8.09□□□□□ -1.11
TMEM260-202ENST00000538838 KRTAP20-1Q3LI63 56 aa8.04□□□□□ -1.12
TMEM260-202ENST00000538838 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
TMEM260-202ENST00000538838 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
TMEM260-202ENST00000538838 KRTAP2-3P0C7H8 128 aa8□□□□□ -1.13
TMEM260-202ENST00000538838 KRTAP2-4Q9BYR9 128 aa8□□□□□ -1.13
TMEM260-202ENST00000538838 LCE3BQ5TA77 95 aa8□□□□□ -1.13
TMEM260-202ENST00000538838 LCE3CQ5T5A8 94 aa7.96□□□□□ -1.13
TMEM260-202ENST00000538838 DSTQ03001 7570 aaKnown RBP7.93□□□□□ -1.14
TMEM260-202ENST00000538838 KRTAP2-2Q9BYT5 123 aa7.8□□□□□ -1.16
TMEM260-202ENST00000538838 KRTAP2-1Q9BYU5 128 aa7.8□□□□□ -1.16
TMEM260-202ENST00000538838 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
TMEM260-202ENST00000538838 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
TMEM260-202ENST00000538838 KRTAP5-5Q701N2 237 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-202ENST00000538838 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
TMEM260-202ENST00000538838 KRTAP5-4Q6L8H1 288 aa7.35□□□□□ -1.23
TMEM260-202ENST00000538838 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
TMEM260-202ENST00000538838 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
TMEM260-202ENST00000538838 MT4P47944 62 aa7.21□□□□□ -1.26
TMEM260-202ENST00000538838 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
TMEM260-202ENST00000538838 MT1AP04731 61 aa7.14□□□□□ -1.27
TMEM260-202ENST00000538838 KRTAP6-1Q3LI64 71 aa7.09□□□□□ -1.27
TMEM260-202ENST00000538838 KRTAP4-6Q9BYQ5 205 aa7.09□□□□□ -1.28
TMEM260-202ENST00000538838 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
TMEM260-202ENST00000538838 H3BS24 57 aa7.02□□□□□ -1.29
TMEM260-202ENST00000538838 KRTAP12-4P60329 112 aa7.02□□□□□ -1.29
TMEM260-202ENST00000538838 NDUFAF8A1L188 74 aa7□□□□□ -1.29
TMEM260-202ENST00000538838 SYNE1Q8NF91 8797 aaKnown RBP6.98□□□□□ -1.29
TMEM260-202ENST00000538838 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.3
TMEM260-202ENST00000538838 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
TMEM260-202ENST00000538838 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
TMEM260-202ENST00000538838 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
TMEM260-202ENST00000538838 KRTAP6-2Q3LI66 62 aa6.62□□□□□ -1.35
TMEM260-202ENST00000538838 KRTAP5-2Q701N4 177 aa6.58□□□□□ -1.36
TMEM260-202ENST00000538838 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
TMEM260-202ENST00000538838 MT3P25713 68 aa6.48□□□□□ -1.37
TMEM260-202ENST00000538838 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
TMEM260-202ENST00000538838 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
TMEM260-202ENST00000538838 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
TMEM260-202ENST00000538838 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
TMEM260-202ENST00000538838 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
TMEM260-202ENST00000538838 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
TMEM260-202ENST00000538838 KRTAP5-7Q6L8G8 165 aa5.89□□□□□ -1.47
TMEM260-202ENST00000538838 LCE3DQ9BYE3 92 aa5.88□□□□□ -1.47
TMEM260-202ENST00000538838 INE1O15225 51 aa5.83□□□□□ -1.48
TMEM260-202ENST00000538838 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
TMEM260-202ENST00000538838 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
TMEM260-202ENST00000538838 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
TMEM260-202ENST00000538838 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
TMEM260-202ENST00000538838 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
TMEM260-202ENST00000538838 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
TMEM260-202ENST00000538838 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
TMEM260-202ENST00000538838 KRTAP4-12Q9BQ66 201 aa5.36□□□□□ -1.55
TMEM260-202ENST00000538838 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
TMEM260-202ENST00000538838 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-202ENST00000538838 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
TMEM260-202ENST00000538838 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
TMEM260-202ENST00000538838 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
TMEM260-202ENST00000538838 PRM1P04553 51 aa4.71□□□□□ -1.66
TMEM260-202ENST00000538838 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
TMEM260-202ENST00000538838 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
TMEM260-202ENST00000538838 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
TMEM260-202ENST00000538838 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
TMEM260-202ENST00000538838 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
TMEM260-202ENST00000538838 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TMEM260-202ENST00000538838 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 7.6 ms