RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
MSRB3-208ENST00000538725 A0A1B0GU69 56 aa7.28□□□□□ -1.24
MSRB3-208ENST00000538725 A8MU10 97 aa7.2□□□□□ -1.26
MSRB3-208ENST00000538725 MT1MQ8N339 61 aa7.2□□□□□ -1.26
MSRB3-208ENST00000538725 MT1LQ93083 61 aa7.19□□□□□ -1.26
MSRB3-208ENST00000538725 TNP1P09430 55 aa7.14□□□□□ -1.27
MSRB3-208ENST00000538725 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
MSRB3-208ENST00000538725 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
MSRB3-208ENST00000538725 C10orf95Q9H7T3 257 aa7.12□□□□□ -1.27
MSRB3-208ENST00000538725 MT4P47944 62 aa7.06□□□□□ -1.28
MSRB3-208ENST00000538725 PCP4P48539 62 aa7.06□□□□□ -1.28
MSRB3-208ENST00000538725 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
MSRB3-208ENST00000538725 KRTAP4-3Q9BYR4 195 aa7.03□□□□□ -1.28
MSRB3-208ENST00000538725 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
MSRB3-208ENST00000538725 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
MSRB3-208ENST00000538725 HMCN1Q96RW7 5635 aa6.98□□□□□ -1.29
MSRB3-208ENST00000538725 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
MSRB3-208ENST00000538725 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
MSRB3-208ENST00000538725 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
MSRB3-208ENST00000538725 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
MSRB3-208ENST00000538725 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
MSRB3-208ENST00000538725 MT3P25713 68 aa6.83□□□□□ -1.32
MSRB3-208ENST00000538725 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
MSRB3-208ENST00000538725 UQCR11O14957 56 aa6.78□□□□□ -1.32
MSRB3-208ENST00000538725 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
MSRB3-208ENST00000538725 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
MSRB3-208ENST00000538725 TMEM258P61165 79 aa6.65□□□□□ -1.34
MSRB3-208ENST00000538725 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
MSRB3-208ENST00000538725 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
MSRB3-208ENST00000538725 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
MSRB3-208ENST00000538725 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
MSRB3-208ENST00000538725 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
MSRB3-208ENST00000538725 K7ERS5 55 aa6.52□□□□□ -1.37
MSRB3-208ENST00000538725 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
MSRB3-208ENST00000538725 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
MSRB3-208ENST00000538725 LCE1EQ5T753 118 aa6.43□□□□□ -1.38
MSRB3-208ENST00000538725 V9GYY9 64 aa6.38□□□□□ -1.39
MSRB3-208ENST00000538725 PSPHP1O15172 72 aa6.37□□□□□ -1.39
MSRB3-208ENST00000538725 KRTAP5-11Q6L8G4 156 aa6.37□□□□□ -1.39
MSRB3-208ENST00000538725 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
MSRB3-208ENST00000538725 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
MSRB3-208ENST00000538725 Q1T7F1 81 aa6.31□□□□□ -1.4
MSRB3-208ENST00000538725 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.27□□□□□ -1.41
MSRB3-208ENST00000538725 A6NED7 52 aa6.14□□□□□ -1.43
MSRB3-208ENST00000538725 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
MSRB3-208ENST00000538725 MT1AP04731 61 aa6.11□□□□□ -1.43
MSRB3-208ENST00000538725 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
MSRB3-208ENST00000538725 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
MSRB3-208ENST00000538725 ROMO1P60602 79 aa6.03□□□□□ -1.44
MSRB3-208ENST00000538725 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
MSRB3-208ENST00000538725 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
MSRB3-208ENST00000538725 LCE1FQ5T754 118 aa5.92□□□□□ -1.46
MSRB3-208ENST00000538725 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
MSRB3-208ENST00000538725 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
MSRB3-208ENST00000538725 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
MSRB3-208ENST00000538725 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
MSRB3-208ENST00000538725 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
MSRB3-208ENST00000538725 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
MSRB3-208ENST00000538725 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
MSRB3-208ENST00000538725 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
MSRB3-208ENST00000538725 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
MSRB3-208ENST00000538725 KRTAP4-4Q9BYR3 166 aa5.18□□□□□ -1.58
MSRB3-208ENST00000538725 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
MSRB3-208ENST00000538725 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
MSRB3-208ENST00000538725 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
MSRB3-208ENST00000538725 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
MSRB3-208ENST00000538725 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
MSRB3-208ENST00000538725 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
MSRB3-208ENST00000538725 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
MSRB3-208ENST00000538725 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
MSRB3-208ENST00000538725 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
MSRB3-208ENST00000538725 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
MSRB3-208ENST00000538725 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
MSRB3-208ENST00000538725 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
MSRB3-208ENST00000538725 PRM1P04553 51 aa3.06□□□□□ -1.92
MSRB3-208ENST00000538725 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
MSRB3-208ENST00000538725 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
MSRB3-208ENST00000538725 INE1O15225 51 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms