RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
PTPN6-210ENST00000538318 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
PTPN6-210ENST00000538318 TNP1P09430 55 aa5.73□□□□□ -1.49
PTPN6-210ENST00000538318 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
PTPN6-210ENST00000538318 A8MU10 97 aa5.72□□□□□ -1.49
PTPN6-210ENST00000538318 TMEM258P61165 79 aa5.7□□□□□ -1.5
PTPN6-210ENST00000538318 A0A1B0GU69 56 aa5.69□□□□□ -1.5
PTPN6-210ENST00000538318 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
PTPN6-210ENST00000538318 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
PTPN6-210ENST00000538318 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
PTPN6-210ENST00000538318 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
PTPN6-210ENST00000538318 PCP4P48539 62 aa5.55□□□□□ -1.52
PTPN6-210ENST00000538318 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PTPN6-210ENST00000538318 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
PTPN6-210ENST00000538318 LINC01558Q9Y6Z2 57 aa5.5□□□□□ -1.53
PTPN6-210ENST00000538318 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
PTPN6-210ENST00000538318 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
PTPN6-210ENST00000538318 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
PTPN6-210ENST00000538318 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
PTPN6-210ENST00000538318 Q1T7F1 81 aa5.33□□□□□ -1.56
PTPN6-210ENST00000538318 V9GYY9 64 aa5.33□□□□□ -1.56
PTPN6-210ENST00000538318 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
PTPN6-210ENST00000538318 UQCR11O14957 56 aa5.3□□□□□ -1.56
PTPN6-210ENST00000538318 PSPHP1O15172 72 aa5.29□□□□□ -1.56
PTPN6-210ENST00000538318 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PTPN6-210ENST00000538318 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
PTPN6-210ENST00000538318 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
PTPN6-210ENST00000538318 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
PTPN6-210ENST00000538318 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
PTPN6-210ENST00000538318 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
PTPN6-210ENST00000538318 A6NED7 52 aa5.11□□□□□ -1.59
PTPN6-210ENST00000538318 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
PTPN6-210ENST00000538318 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
PTPN6-210ENST00000538318 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
PTPN6-210ENST00000538318 K7ERS5 55 aa5.06□□□□□ -1.6
PTPN6-210ENST00000538318 MT1AP04731 61 aa5.04□□□□□ -1.6
PTPN6-210ENST00000538318 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
PTPN6-210ENST00000538318 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
PTPN6-210ENST00000538318 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
PTPN6-210ENST00000538318 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
PTPN6-210ENST00000538318 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
PTPN6-210ENST00000538318 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
PTPN6-210ENST00000538318 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
PTPN6-210ENST00000538318 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
PTPN6-210ENST00000538318 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
PTPN6-210ENST00000538318 ROMO1P60602 79 aa4.77□□□□□ -1.65
PTPN6-210ENST00000538318 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
PTPN6-210ENST00000538318 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
PTPN6-210ENST00000538318 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
PTPN6-210ENST00000538318 MT3P25713 68 aa4.62□□□□□ -1.67
PTPN6-210ENST00000538318 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
PTPN6-210ENST00000538318 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
PTPN6-210ENST00000538318 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
PTPN6-210ENST00000538318 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
PTPN6-210ENST00000538318 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
PTPN6-210ENST00000538318 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
PTPN6-210ENST00000538318 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
PTPN6-210ENST00000538318 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
PTPN6-210ENST00000538318 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
PTPN6-210ENST00000538318 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
PTPN6-210ENST00000538318 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
PTPN6-210ENST00000538318 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
PTPN6-210ENST00000538318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
PTPN6-210ENST00000538318 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
PTPN6-210ENST00000538318 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PTPN6-210ENST00000538318 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
PTPN6-210ENST00000538318 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
PTPN6-210ENST00000538318 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
PTPN6-210ENST00000538318 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
PTPN6-210ENST00000538318 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
PTPN6-210ENST00000538318 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
PTPN6-210ENST00000538318 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
PTPN6-210ENST00000538318 H3BS24 57 aa2.68□□□□□ -1.98
PTPN6-210ENST00000538318 A0A0A0MQY5 61 aa2.56□□□□□ -2
PTPN6-210ENST00000538318 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
PTPN6-210ENST00000538318 INE1O15225 51 aa2.51□□□□□ -2.01
PTPN6-210ENST00000538318 PRM1P04553 51 aa2.47□□□□□ -2.01
PTPN6-210ENST00000538318 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 142 ms