RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
AC087235.1-201ENST00000538297 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
AC087235.1-201ENST00000538297 A8MU10 97 aa4.5□□□□□ -1.69
AC087235.1-201ENST00000538297 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
AC087235.1-201ENST00000538297 K7ERS5 55 aa4.46□□□□□ -1.69
AC087235.1-201ENST00000538297 A6NED7 52 aa4.46□□□□□ -1.7
AC087235.1-201ENST00000538297 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
AC087235.1-201ENST00000538297 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
AC087235.1-201ENST00000538297 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
AC087235.1-201ENST00000538297 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
AC087235.1-201ENST00000538297 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
AC087235.1-201ENST00000538297 TNP1P09430 55 aa4.33□□□□□ -1.72
AC087235.1-201ENST00000538297 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
AC087235.1-201ENST00000538297 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
AC087235.1-201ENST00000538297 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
AC087235.1-201ENST00000538297 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
AC087235.1-201ENST00000538297 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
AC087235.1-201ENST00000538297 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
AC087235.1-201ENST00000538297 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
AC087235.1-201ENST00000538297 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
AC087235.1-201ENST00000538297 ROMO1P60602 79 aa4.16□□□□□ -1.74
AC087235.1-201ENST00000538297 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
AC087235.1-201ENST00000538297 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
AC087235.1-201ENST00000538297 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
AC087235.1-201ENST00000538297 SPRR2EP22531 72 aa4.1□□□□□ -1.75
AC087235.1-201ENST00000538297 SPRR2BP35325 72 aa4.1□□□□□ -1.75
AC087235.1-201ENST00000538297 SPRR2AP35326 72 aa4.1□□□□□ -1.75
AC087235.1-201ENST00000538297 KMT2DO14686 5537 aa4.1□□□□□ -1.75
AC087235.1-201ENST00000538297 MT1EP04732 61 aa4.06□□□□□ -1.76
AC087235.1-201ENST00000538297 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
AC087235.1-201ENST00000538297 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
AC087235.1-201ENST00000538297 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
AC087235.1-201ENST00000538297 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
AC087235.1-201ENST00000538297 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
AC087235.1-201ENST00000538297 MT1GP13640 62 aa3.98□□□□□ -1.77
AC087235.1-201ENST00000538297 SPRR2DP22532 72 aa3.96□□□□□ -1.77
AC087235.1-201ENST00000538297 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
AC087235.1-201ENST00000538297 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
AC087235.1-201ENST00000538297 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
AC087235.1-201ENST00000538297 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
AC087235.1-201ENST00000538297 MT1LQ93083 61 aa3.94□□□□□ -1.78
AC087235.1-201ENST00000538297 NEBP20929 6669 aa3.92□□□□□ -1.78
AC087235.1-201ENST00000538297 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
AC087235.1-201ENST00000538297 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
AC087235.1-201ENST00000538297 MT1MQ8N339 61 aa3.84□□□□□ -1.79
AC087235.1-201ENST00000538297 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
AC087235.1-201ENST00000538297 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
AC087235.1-201ENST00000538297 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
AC087235.1-201ENST00000538297 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
AC087235.1-201ENST00000538297 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
AC087235.1-201ENST00000538297 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
AC087235.1-201ENST00000538297 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
AC087235.1-201ENST00000538297 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
AC087235.1-201ENST00000538297 MT4P47944 62 aa3.4□□□□□ -1.87
AC087235.1-201ENST00000538297 MT1AP04731 61 aa3.37□□□□□ -1.87
AC087235.1-201ENST00000538297 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
AC087235.1-201ENST00000538297 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
AC087235.1-201ENST00000538297 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
AC087235.1-201ENST00000538297 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
AC087235.1-201ENST00000538297 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
AC087235.1-201ENST00000538297 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
AC087235.1-201ENST00000538297 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
AC087235.1-201ENST00000538297 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
AC087235.1-201ENST00000538297 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
AC087235.1-201ENST00000538297 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
AC087235.1-201ENST00000538297 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
AC087235.1-201ENST00000538297 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
AC087235.1-201ENST00000538297 INE1O15225 51 aa2.82□□□□□ -1.96
AC087235.1-201ENST00000538297 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
AC087235.1-201ENST00000538297 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
AC087235.1-201ENST00000538297 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
AC087235.1-201ENST00000538297 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
AC087235.1-201ENST00000538297 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
AC087235.1-201ENST00000538297 PRM1P04553 51 aa2.09□□□□□ -2.08
AC087235.1-201ENST00000538297 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
AC087235.1-201ENST00000538297 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
AC087235.1-201ENST00000538297 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 126.1 ms