RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
CLPB-208ENST00000538021 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
CLPB-208ENST00000538021 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
CLPB-208ENST00000538021 COA5Q86WW8 74 aa3.94□□□□□ -1.78
CLPB-208ENST00000538021 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
CLPB-208ENST00000538021 A0A0D9SG42 100 aa3.9□□□□□ -1.79
CLPB-208ENST00000538021 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CLPB-208ENST00000538021 MT1LQ93083 61 aa3.89□□□□□ -1.79
CLPB-208ENST00000538021 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
CLPB-208ENST00000538021 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
CLPB-208ENST00000538021 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
CLPB-208ENST00000538021 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
CLPB-208ENST00000538021 SEC61GP60059 68 aa3.76□□□□□ -1.81
CLPB-208ENST00000538021 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CLPB-208ENST00000538021 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
CLPB-208ENST00000538021 A0A1B0GU69 56 aa3.73□□□□□ -1.81
CLPB-208ENST00000538021 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
CLPB-208ENST00000538021 LINC01558Q9Y6Z2 57 aa3.73□□□□□ -1.81
CLPB-208ENST00000538021 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.81
CLPB-208ENST00000538021 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CLPB-208ENST00000538021 PRR15LQ9BU68 103 aa3.71□□□□□ -1.82
CLPB-208ENST00000538021 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
CLPB-208ENST00000538021 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
CLPB-208ENST00000538021 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
CLPB-208ENST00000538021 V9GYY9 64 aa3.69□□□□□ -1.82
CLPB-208ENST00000538021 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CLPB-208ENST00000538021 Q1T7F1 81 aa3.67□□□□□ -1.82
CLPB-208ENST00000538021 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
CLPB-208ENST00000538021 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
CLPB-208ENST00000538021 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
CLPB-208ENST00000538021 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
CLPB-208ENST00000538021 UQCR11O14957 56 aa3.59□□□□□ -1.83
CLPB-208ENST00000538021 PSPHP1O15172 72 aa3.59□□□□□ -1.83
CLPB-208ENST00000538021 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CLPB-208ENST00000538021 A8MU10 97 aa3.52□□□□□ -1.85
CLPB-208ENST00000538021 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
CLPB-208ENST00000538021 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
CLPB-208ENST00000538021 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
CLPB-208ENST00000538021 A6NED7 52 aa3.5□□□□□ -1.85
CLPB-208ENST00000538021 TNP1P09430 55 aa3.5□□□□□ -1.85
CLPB-208ENST00000538021 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
CLPB-208ENST00000538021 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
CLPB-208ENST00000538021 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
CLPB-208ENST00000538021 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
CLPB-208ENST00000538021 K7ERS5 55 aa3.41□□□□□ -1.86
CLPB-208ENST00000538021 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
CLPB-208ENST00000538021 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
CLPB-208ENST00000538021 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
CLPB-208ENST00000538021 MT1AP04731 61 aa3.3□□□□□ -1.88
CLPB-208ENST00000538021 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CLPB-208ENST00000538021 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
CLPB-208ENST00000538021 ROMO1P60602 79 aa3.22□□□□□ -1.89
CLPB-208ENST00000538021 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
CLPB-208ENST00000538021 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
CLPB-208ENST00000538021 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
CLPB-208ENST00000538021 MT3P25713 68 aa3.05□□□□□ -1.92
CLPB-208ENST00000538021 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
CLPB-208ENST00000538021 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
CLPB-208ENST00000538021 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
CLPB-208ENST00000538021 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
CLPB-208ENST00000538021 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
CLPB-208ENST00000538021 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CLPB-208ENST00000538021 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
CLPB-208ENST00000538021 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
CLPB-208ENST00000538021 A0A0A0MQY5 61 aa2.57□□□□□ -2
CLPB-208ENST00000538021 PHGR1C9JFL3 82 aa2.55□□□□□ -2
CLPB-208ENST00000538021 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
CLPB-208ENST00000538021 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
CLPB-208ENST00000538021 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
CLPB-208ENST00000538021 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CLPB-208ENST00000538021 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CLPB-208ENST00000538021 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
CLPB-208ENST00000538021 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
CLPB-208ENST00000538021 INE1O15225 51 aa2.09□□□□□ -2.07
CLPB-208ENST00000538021 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
CLPB-208ENST00000538021 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CLPB-208ENST00000538021 PRM1P04553 51 aa1.66□□□□□ -2.14
CLPB-208ENST00000538021 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms