RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 NDUFAF8A1L188 74 aa5.7□□□□□ -1.5
SFSWAP-206ENST00000537582 H3BS24 57 aa5.69□□□□□ -1.5
SFSWAP-206ENST00000537582 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
SFSWAP-206ENST00000537582 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
SFSWAP-206ENST00000537582 NEBP20929 6669 aa5.62□□□□□ -1.51
SFSWAP-206ENST00000537582 SPRR2EP22531 72 aa5.6□□□□□ -1.51
SFSWAP-206ENST00000537582 SPRR2BP35325 72 aa5.6□□□□□ -1.51
SFSWAP-206ENST00000537582 SPRR2AP35326 72 aa5.6□□□□□ -1.51
SFSWAP-206ENST00000537582 MT1LQ93083 61 aa5.6□□□□□ -1.51
SFSWAP-206ENST00000537582 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
SFSWAP-206ENST00000537582 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
SFSWAP-206ENST00000537582 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
SFSWAP-206ENST00000537582 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
SFSWAP-206ENST00000537582 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.53
SFSWAP-206ENST00000537582 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.53
SFSWAP-206ENST00000537582 MT1GP13640 62 aa5.46□□□□□ -1.54
SFSWAP-206ENST00000537582 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SFSWAP-206ENST00000537582 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SFSWAP-206ENST00000537582 SPRR2DP22532 72 aa5.39□□□□□ -1.55
SFSWAP-206ENST00000537582 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
SFSWAP-206ENST00000537582 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
SFSWAP-206ENST00000537582 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
SFSWAP-206ENST00000537582 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SFSWAP-206ENST00000537582 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
SFSWAP-206ENST00000537582 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
SFSWAP-206ENST00000537582 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
SFSWAP-206ENST00000537582 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
SFSWAP-206ENST00000537582 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
SFSWAP-206ENST00000537582 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
SFSWAP-206ENST00000537582 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
SFSWAP-206ENST00000537582 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
SFSWAP-206ENST00000537582 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
SFSWAP-206ENST00000537582 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
SFSWAP-206ENST00000537582 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
SFSWAP-206ENST00000537582 INE1O15225 51 aa4.75□□□□□ -1.65
SFSWAP-206ENST00000537582 MT1AP04731 61 aa4.74□□□□□ -1.65
SFSWAP-206ENST00000537582 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
SFSWAP-206ENST00000537582 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SFSWAP-206ENST00000537582 MT4P47944 62 aa4.73□□□□□ -1.65
SFSWAP-206ENST00000537582 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SFSWAP-206ENST00000537582 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
SFSWAP-206ENST00000537582 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
SFSWAP-206ENST00000537582 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
SFSWAP-206ENST00000537582 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SFSWAP-206ENST00000537582 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
SFSWAP-206ENST00000537582 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
SFSWAP-206ENST00000537582 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.69
SFSWAP-206ENST00000537582 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
SFSWAP-206ENST00000537582 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
SFSWAP-206ENST00000537582 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
SFSWAP-206ENST00000537582 MT3P25713 68 aa4.28□□□□□ -1.72
SFSWAP-206ENST00000537582 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
SFSWAP-206ENST00000537582 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
SFSWAP-206ENST00000537582 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
SFSWAP-206ENST00000537582 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
SFSWAP-206ENST00000537582 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
SFSWAP-206ENST00000537582 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
SFSWAP-206ENST00000537582 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
SFSWAP-206ENST00000537582 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
SFSWAP-206ENST00000537582 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
SFSWAP-206ENST00000537582 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
SFSWAP-206ENST00000537582 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SFSWAP-206ENST00000537582 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
SFSWAP-206ENST00000537582 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
SFSWAP-206ENST00000537582 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
SFSWAP-206ENST00000537582 PRM1P04553 51 aa3.52□□□□□ -1.85
SFSWAP-206ENST00000537582 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SFSWAP-206ENST00000537582 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
SFSWAP-206ENST00000537582 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-206ENST00000537582 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SFSWAP-206ENST00000537582 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SFSWAP-206ENST00000537582 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
SFSWAP-206ENST00000537582 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
SFSWAP-206ENST00000537582 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SFSWAP-206ENST00000537582 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
SFSWAP-206ENST00000537582 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
SFSWAP-206ENST00000537582 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SFSWAP-206ENST00000537582 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 118.8 ms