RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MT4P47944 62 aa7□□□□□ -1.29
TNFRSF1B-204ENST00000536782 AHNAK2Q8IVF2 5795 aa6.99□□□□□ -1.29
TNFRSF1B-204ENST00000536782 MT1LQ93083 61 aa6.97□□□□□ -1.29
TNFRSF1B-204ENST00000536782 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
TNFRSF1B-204ENST00000536782 Q1T7F1 81 aa6.89□□□□□ -1.31
TNFRSF1B-204ENST00000536782 TNP1P09430 55 aa6.88□□□□□ -1.31
TNFRSF1B-204ENST00000536782 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
TNFRSF1B-204ENST00000536782 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
TNFRSF1B-204ENST00000536782 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
TNFRSF1B-204ENST00000536782 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
TNFRSF1B-204ENST00000536782 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
TNFRSF1B-204ENST00000536782 PCP4P48539 62 aa6.83□□□□□ -1.32
TNFRSF1B-204ENST00000536782 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
TNFRSF1B-204ENST00000536782 K7ERS5 55 aa6.81□□□□□ -1.32
TNFRSF1B-204ENST00000536782 PSPHP1O15172 72 aa6.81□□□□□ -1.32
TNFRSF1B-204ENST00000536782 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1B-204ENST00000536782 A6NED7 52 aa6.65□□□□□ -1.34
TNFRSF1B-204ENST00000536782 KRTAP5-7Q6L8G8 165 aa6.63□□□□□ -1.35
TNFRSF1B-204ENST00000536782 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
TNFRSF1B-204ENST00000536782 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
TNFRSF1B-204ENST00000536782 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
TNFRSF1B-204ENST00000536782 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
TNFRSF1B-204ENST00000536782 KRTAP20-2Q3LI61 65 aa6.5□□□□□ -1.37
TNFRSF1B-204ENST00000536782 KRTAP5-5Q701N2 237 aaPredicted RBP6.45□□□□□ -1.38
TNFRSF1B-204ENST00000536782 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
TNFRSF1B-204ENST00000536782 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
TNFRSF1B-204ENST00000536782 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
TNFRSF1B-204ENST00000536782 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
TNFRSF1B-204ENST00000536782 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
TNFRSF1B-204ENST00000536782 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
TNFRSF1B-204ENST00000536782 ROMO1P60602 79 aa6.28□□□□□ -1.4
TNFRSF1B-204ENST00000536782 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
TNFRSF1B-204ENST00000536782 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
TNFRSF1B-204ENST00000536782 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
TNFRSF1B-204ENST00000536782 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
TNFRSF1B-204ENST00000536782 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
TNFRSF1B-204ENST00000536782 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
TNFRSF1B-204ENST00000536782 MT1AP04731 61 aa5.94□□□□□ -1.46
TNFRSF1B-204ENST00000536782 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
TNFRSF1B-204ENST00000536782 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
TNFRSF1B-204ENST00000536782 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
TNFRSF1B-204ENST00000536782 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
TNFRSF1B-204ENST00000536782 MUC5BQ9HC84 5762 aaPredicted RBP5.79□□□□□ -1.48
TNFRSF1B-204ENST00000536782 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
TNFRSF1B-204ENST00000536782 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
TNFRSF1B-204ENST00000536782 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
TNFRSF1B-204ENST00000536782 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
TNFRSF1B-204ENST00000536782 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
TNFRSF1B-204ENST00000536782 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
TNFRSF1B-204ENST00000536782 MT3P25713 68 aa5.45□□□□□ -1.54
TNFRSF1B-204ENST00000536782 KRTAP5-1Q6L8H4 278 aa5.43□□□□□ -1.54
TNFRSF1B-204ENST00000536782 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
TNFRSF1B-204ENST00000536782 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
TNFRSF1B-204ENST00000536782 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
TNFRSF1B-204ENST00000536782 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
TNFRSF1B-204ENST00000536782 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
TNFRSF1B-204ENST00000536782 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
TNFRSF1B-204ENST00000536782 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
TNFRSF1B-204ENST00000536782 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
TNFRSF1B-204ENST00000536782 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
TNFRSF1B-204ENST00000536782 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
TNFRSF1B-204ENST00000536782 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
TNFRSF1B-204ENST00000536782 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
TNFRSF1B-204ENST00000536782 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
TNFRSF1B-204ENST00000536782 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
TNFRSF1B-204ENST00000536782 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TNFRSF1B-204ENST00000536782 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
TNFRSF1B-204ENST00000536782 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
TNFRSF1B-204ENST00000536782 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
TNFRSF1B-204ENST00000536782 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
TNFRSF1B-204ENST00000536782 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
TNFRSF1B-204ENST00000536782 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
TNFRSF1B-204ENST00000536782 PRM1P04553 51 aa3.18□□□□□ -1.9
TNFRSF1B-204ENST00000536782 INE1O15225 51 aa3.17□□□□□ -1.9
TNFRSF1B-204ENST00000536782 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
TNFRSF1B-204ENST00000536782 H3BS24 57 aa2.98□□□□□ -1.93
TNFRSF1B-204ENST00000536782 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 56.5 ms