RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 MT1LQ93083 61 aa4.68□□□□□ -1.66
MRPS35-202ENST00000536569 H3BS24 57 aa4.67□□□□□ -1.66
MRPS35-202ENST00000536569 TNP1P09430 55 aa4.67□□□□□ -1.66
MRPS35-202ENST00000536569 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
MRPS35-202ENST00000536569 A8MU10 97 aa4.65□□□□□ -1.67
MRPS35-202ENST00000536569 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
MRPS35-202ENST00000536569 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
MRPS35-202ENST00000536569 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
MRPS35-202ENST00000536569 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
MRPS35-202ENST00000536569 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
MRPS35-202ENST00000536569 MT4P47944 62 aa4.56□□□□□ -1.68
MRPS35-202ENST00000536569 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
MRPS35-202ENST00000536569 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
MRPS35-202ENST00000536569 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
MRPS35-202ENST00000536569 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
MRPS35-202ENST00000536569 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
MRPS35-202ENST00000536569 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
MRPS35-202ENST00000536569 UQCR11O14957 56 aa4.44□□□□□ -1.7
MRPS35-202ENST00000536569 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
MRPS35-202ENST00000536569 TMEM258P61165 79 aa4.37□□□□□ -1.71
MRPS35-202ENST00000536569 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
MRPS35-202ENST00000536569 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
MRPS35-202ENST00000536569 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
MRPS35-202ENST00000536569 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
MRPS35-202ENST00000536569 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
MRPS35-202ENST00000536569 K7ERS5 55 aa4.29□□□□□ -1.72
MRPS35-202ENST00000536569 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
MRPS35-202ENST00000536569 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
MRPS35-202ENST00000536569 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
MRPS35-202ENST00000536569 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
MRPS35-202ENST00000536569 V9GYY9 64 aa4.21□□□□□ -1.74
MRPS35-202ENST00000536569 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
MRPS35-202ENST00000536569 Q1T7F1 81 aa4.14□□□□□ -1.75
MRPS35-202ENST00000536569 PSPHP1O15172 72 aa4.12□□□□□ -1.75
MRPS35-202ENST00000536569 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
MRPS35-202ENST00000536569 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
MRPS35-202ENST00000536569 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
MRPS35-202ENST00000536569 A6NED7 52 aa4□□□□□ -1.77
MRPS35-202ENST00000536569 MT1AP04731 61 aa3.99□□□□□ -1.77
MRPS35-202ENST00000536569 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
MRPS35-202ENST00000536569 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
MRPS35-202ENST00000536569 ROMO1P60602 79 aa3.94□□□□□ -1.78
MRPS35-202ENST00000536569 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
MRPS35-202ENST00000536569 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
MRPS35-202ENST00000536569 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
MRPS35-202ENST00000536569 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
MRPS35-202ENST00000536569 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
MRPS35-202ENST00000536569 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
MRPS35-202ENST00000536569 MT3P25713 68 aa3.68□□□□□ -1.82
MRPS35-202ENST00000536569 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
MRPS35-202ENST00000536569 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
MRPS35-202ENST00000536569 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
MRPS35-202ENST00000536569 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
MRPS35-202ENST00000536569 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
MRPS35-202ENST00000536569 PCP4P48539 62 aa3.54□□□□□ -1.84
MRPS35-202ENST00000536569 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
MRPS35-202ENST00000536569 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
MRPS35-202ENST00000536569 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
MRPS35-202ENST00000536569 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
MRPS35-202ENST00000536569 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
MRPS35-202ENST00000536569 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
MRPS35-202ENST00000536569 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
MRPS35-202ENST00000536569 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
MRPS35-202ENST00000536569 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
MRPS35-202ENST00000536569 SVIPQ8NHG7 77 aa2.82□□□□□ -1.96
MRPS35-202ENST00000536569 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
MRPS35-202ENST00000536569 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
MRPS35-202ENST00000536569 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
MRPS35-202ENST00000536569 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
MRPS35-202ENST00000536569 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
MRPS35-202ENST00000536569 PHGR1C9JFL3 82 aa2.55□□□□□ -2
MRPS35-202ENST00000536569 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
MRPS35-202ENST00000536569 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
MRPS35-202ENST00000536569 PRM1P04553 51 aa1.98□□□□□ -2.09
MRPS35-202ENST00000536569 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
MRPS35-202ENST00000536569 NDUFAF8A1L188 74 aa1.85□□□□□ -2.11
MRPS35-202ENST00000536569 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
MRPS35-202ENST00000536569 INE1O15225 51 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 73.3 ms