RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 MT1BP07438 61 aa3.49□□□□□ -1.85
TOM1L1-203ENST00000536554 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
TOM1L1-203ENST00000536554 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
TOM1L1-203ENST00000536554 USH2AO75445 5202 aa3.48□□□□□ -1.85
TOM1L1-203ENST00000536554 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
TOM1L1-203ENST00000536554 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
TOM1L1-203ENST00000536554 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
TOM1L1-203ENST00000536554 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
TOM1L1-203ENST00000536554 MT1XP80297 61 aa3.36□□□□□ -1.87
TOM1L1-203ENST00000536554 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
TOM1L1-203ENST00000536554 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
TOM1L1-203ENST00000536554 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
TOM1L1-203ENST00000536554 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
TOM1L1-203ENST00000536554 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
TOM1L1-203ENST00000536554 TNP1P09430 55 aa3.24□□□□□ -1.89
TOM1L1-203ENST00000536554 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
TOM1L1-203ENST00000536554 KMT2DO14686 5537 aa3.15□□□□□ -1.9
TOM1L1-203ENST00000536554 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
TOM1L1-203ENST00000536554 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
TOM1L1-203ENST00000536554 INE1O15225 51 aa3.12□□□□□ -1.91
TOM1L1-203ENST00000536554 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
TOM1L1-203ENST00000536554 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
TOM1L1-203ENST00000536554 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
TOM1L1-203ENST00000536554 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
TOM1L1-203ENST00000536554 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
TOM1L1-203ENST00000536554 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.93
TOM1L1-203ENST00000536554 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
TOM1L1-203ENST00000536554 KRTAP12-3P60328 96 aa3□□□□□ -1.93
TOM1L1-203ENST00000536554 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
TOM1L1-203ENST00000536554 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
TOM1L1-203ENST00000536554 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
TOM1L1-203ENST00000536554 MT1EP04732 61 aa2.94□□□□□ -1.94
TOM1L1-203ENST00000536554 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
TOM1L1-203ENST00000536554 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
TOM1L1-203ENST00000536554 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
TOM1L1-203ENST00000536554 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
TOM1L1-203ENST00000536554 MT1LQ93083 61 aa2.88□□□□□ -1.95
TOM1L1-203ENST00000536554 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
TOM1L1-203ENST00000536554 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
TOM1L1-203ENST00000536554 MT1GP13640 62 aa2.83□□□□□ -1.96
TOM1L1-203ENST00000536554 SPRR2EP22531 72 aa2.79□□□□□ -1.96
TOM1L1-203ENST00000536554 SPRR2BP35325 72 aa2.79□□□□□ -1.96
TOM1L1-203ENST00000536554 SPRR2AP35326 72 aa2.79□□□□□ -1.96
TOM1L1-203ENST00000536554 MT1MQ8N339 61 aa2.78□□□□□ -1.97
TOM1L1-203ENST00000536554 NEBP20929 6669 aa2.77□□□□□ -1.97
TOM1L1-203ENST00000536554 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
TOM1L1-203ENST00000536554 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
TOM1L1-203ENST00000536554 SPRR2DP22532 72 aa2.69□□□□□ -1.98
TOM1L1-203ENST00000536554 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
TOM1L1-203ENST00000536554 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
TOM1L1-203ENST00000536554 KRTAP5-8O75690 187 aa2.54□□□□□ -2
TOM1L1-203ENST00000536554 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
TOM1L1-203ENST00000536554 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
TOM1L1-203ENST00000536554 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
TOM1L1-203ENST00000536554 MT1AP04731 61 aa2.44□□□□□ -2.02
TOM1L1-203ENST00000536554 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
TOM1L1-203ENST00000536554 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
TOM1L1-203ENST00000536554 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
TOM1L1-203ENST00000536554 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
TOM1L1-203ENST00000536554 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
TOM1L1-203ENST00000536554 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
TOM1L1-203ENST00000536554 MT4P47944 62 aa2.33□□□□□ -2.04
TOM1L1-203ENST00000536554 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
TOM1L1-203ENST00000536554 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
TOM1L1-203ENST00000536554 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
TOM1L1-203ENST00000536554 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
TOM1L1-203ENST00000536554 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
TOM1L1-203ENST00000536554 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
TOM1L1-203ENST00000536554 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
TOM1L1-203ENST00000536554 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
TOM1L1-203ENST00000536554 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
TOM1L1-203ENST00000536554 PRM1P04553 51 aa1.8□□□□□ -2.12
TOM1L1-203ENST00000536554 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
TOM1L1-203ENST00000536554 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
TOM1L1-203ENST00000536554 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
TOM1L1-203ENST00000536554 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
TOM1L1-203ENST00000536554 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 170.5 ms