RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 MT1EP04732 61 aa7.5□□□□□ -1.21
TRIM3-214ENST00000536344 KRTAP2-3P0C7H8 128 aa7.41□□□□□ -1.22
TRIM3-214ENST00000536344 MT1LQ93083 61 aa7.41□□□□□ -1.22
TRIM3-214ENST00000536344 KRTAP2-4Q9BYR9 128 aa7.41□□□□□ -1.22
TRIM3-214ENST00000536344 KRTAP2-1Q9BYU5 128 aa7.41□□□□□ -1.22
TRIM3-214ENST00000536344 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
TRIM3-214ENST00000536344 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
TRIM3-214ENST00000536344 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
TRIM3-214ENST00000536344 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
TRIM3-214ENST00000536344 KRTAP4-3Q9BYR4 195 aa7.25□□□□□ -1.25
TRIM3-214ENST00000536344 KRTAP19-3Q7Z4W3 81 aa7.13□□□□□ -1.27
TRIM3-214ENST00000536344 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
TRIM3-214ENST00000536344 MT1MQ8N339 61 aa7.06□□□□□ -1.28
TRIM3-214ENST00000536344 MT1GP13640 62 aa7.02□□□□□ -1.29
TRIM3-214ENST00000536344 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
TRIM3-214ENST00000536344 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
TRIM3-214ENST00000536344 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
TRIM3-214ENST00000536344 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
TRIM3-214ENST00000536344 KRTAP12-4P60329 112 aa6.84□□□□□ -1.32
TRIM3-214ENST00000536344 LCE1AQ5T7P2 110 aa6.83□□□□□ -1.32
TRIM3-214ENST00000536344 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
TRIM3-214ENST00000536344 SPRR2EP22531 72 aa6.79□□□□□ -1.32
TRIM3-214ENST00000536344 SPRR2BP35325 72 aa6.79□□□□□ -1.32
TRIM3-214ENST00000536344 SPRR2AP35326 72 aa6.79□□□□□ -1.32
TRIM3-214ENST00000536344 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
TRIM3-214ENST00000536344 KRTAP6-3Q3LI67 103 aa6.58□□□□□ -1.36
TRIM3-214ENST00000536344 SPRR2DP22532 72 aa6.5□□□□□ -1.37
TRIM3-214ENST00000536344 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
TRIM3-214ENST00000536344 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
TRIM3-214ENST00000536344 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
TRIM3-214ENST00000536344 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
TRIM3-214ENST00000536344 NEBP20929 6669 aa6.33□□□□□ -1.4
TRIM3-214ENST00000536344 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
TRIM3-214ENST00000536344 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
TRIM3-214ENST00000536344 MT1AP04731 61 aa6.19□□□□□ -1.42
TRIM3-214ENST00000536344 PRM1P04553 51 aa6.16□□□□□ -1.42
TRIM3-214ENST00000536344 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
TRIM3-214ENST00000536344 LCE3EQ5T5B0 92 aa5.98□□□□□ -1.45
TRIM3-214ENST00000536344 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
TRIM3-214ENST00000536344 MT4P47944 62 aa5.83□□□□□ -1.48
TRIM3-214ENST00000536344 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
TRIM3-214ENST00000536344 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
TRIM3-214ENST00000536344 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
TRIM3-214ENST00000536344 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
TRIM3-214ENST00000536344 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
TRIM3-214ENST00000536344 MT3P25713 68 aa5.6□□□□□ -1.51
TRIM3-214ENST00000536344 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.52
TRIM3-214ENST00000536344 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
TRIM3-214ENST00000536344 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
TRIM3-214ENST00000536344 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
TRIM3-214ENST00000536344 KRTAP5-2Q701N4 177 aa5.26□□□□□ -1.57
TRIM3-214ENST00000536344 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
TRIM3-214ENST00000536344 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
TRIM3-214ENST00000536344 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
TRIM3-214ENST00000536344 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
TRIM3-214ENST00000536344 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
TRIM3-214ENST00000536344 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
TRIM3-214ENST00000536344 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
TRIM3-214ENST00000536344 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TRIM3-214ENST00000536344 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
TRIM3-214ENST00000536344 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
TRIM3-214ENST00000536344 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
TRIM3-214ENST00000536344 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
TRIM3-214ENST00000536344 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
TRIM3-214ENST00000536344 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
TRIM3-214ENST00000536344 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
TRIM3-214ENST00000536344 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
TRIM3-214ENST00000536344 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
TRIM3-214ENST00000536344 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
TRIM3-214ENST00000536344 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
TRIM3-214ENST00000536344 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
TRIM3-214ENST00000536344 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
TRIM3-214ENST00000536344 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
TRIM3-214ENST00000536344 KRTAP21-1Q3LI58 79 aa3.82□□□□□ -1.8
TRIM3-214ENST00000536344 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
TRIM3-214ENST00000536344 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
TRIM3-214ENST00000536344 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms