RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
MCF2-210ENST00000536274 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
MCF2-210ENST00000536274 TNP1P09430 55 aa1.56□□□□□ -2.16
MCF2-210ENST00000536274 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
MCF2-210ENST00000536274 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
MCF2-210ENST00000536274 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
MCF2-210ENST00000536274 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
MCF2-210ENST00000536274 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
MCF2-210ENST00000536274 NEBP20929 6669 aa1.48□□□□□ -2.17
MCF2-210ENST00000536274 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
MCF2-210ENST00000536274 USH2AO75445 5202 aa1.48□□□□□ -2.17
MCF2-210ENST00000536274 MT2AP02795 61 aa1.47□□□□□ -2.17
MCF2-210ENST00000536274 M0R2T5 61 aa1.47□□□□□ -2.17
MCF2-210ENST00000536274 KMT2DO14686 5537 aa1.45□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP10-10P60014 251 aa1.45□□□□□ -2.18
MCF2-210ENST00000536274 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP10-12P60413 245 aa1.44□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
MCF2-210ENST00000536274 MT1FP04733 61 aa1.43□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
MCF2-210ENST00000536274 KRTAP12-3P60328 96 aa1.4□□□□□ -2.19
MCF2-210ENST00000536274 LCE3CQ5T5A8 94 aa1.39□□□□□ -2.19
MCF2-210ENST00000536274 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
MCF2-210ENST00000536274 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
MCF2-210ENST00000536274 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
MCF2-210ENST00000536274 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
MCF2-210ENST00000536274 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
MCF2-210ENST00000536274 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
MCF2-210ENST00000536274 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
MCF2-210ENST00000536274 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
MCF2-210ENST00000536274 MT1BP07438 61 aa1.32□□□□□ -2.2
MCF2-210ENST00000536274 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
MCF2-210ENST00000536274 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
MCF2-210ENST00000536274 MT1XP80297 61 aa1.31□□□□□ -2.2
MCF2-210ENST00000536274 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
MCF2-210ENST00000536274 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
MCF2-210ENST00000536274 LCE3EQ5T5B0 92 aa1.3□□□□□ -2.2
MCF2-210ENST00000536274 OBSCNQ5VST9 7968 aa1.29□□□□□ -2.2
MCF2-210ENST00000536274 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
MCF2-210ENST00000536274 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
MCF2-210ENST00000536274 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
MCF2-210ENST00000536274 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
MCF2-210ENST00000536274 SPRR2EP22531 72 aa1.25□□□□□ -2.21
MCF2-210ENST00000536274 SPRR2BP35325 72 aa1.25□□□□□ -2.21
MCF2-210ENST00000536274 SPRR2AP35326 72 aa1.25□□□□□ -2.21
MCF2-210ENST00000536274 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
MCF2-210ENST00000536274 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
MCF2-210ENST00000536274 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
MCF2-210ENST00000536274 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
MCF2-210ENST00000536274 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
MCF2-210ENST00000536274 SPRR2DP22532 72 aa1.23□□□□□ -2.21
MCF2-210ENST00000536274 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
MCF2-210ENST00000536274 KRTAP4-3Q9BYR4 195 aa1.21□□□□□ -2.22
MCF2-210ENST00000536274 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
MCF2-210ENST00000536274 PRM1P04553 51 aa1.19□□□□□ -2.22
MCF2-210ENST00000536274 MT1GP13640 62 aa1.17□□□□□ -2.22
MCF2-210ENST00000536274 LCE3DQ9BYE3 92 aa1.16□□□□□ -2.22
MCF2-210ENST00000536274 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
MCF2-210ENST00000536274 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
MCF2-210ENST00000536274 MT1LQ93083 61 aa1.13□□□□□ -2.23
MCF2-210ENST00000536274 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
MCF2-210ENST00000536274 LCE1BQ5T7P3 118 aa1.12□□□□□ -2.23
MCF2-210ENST00000536274 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
MCF2-210ENST00000536274 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
MCF2-210ENST00000536274 MT1EP04732 61 aa1.09□□□□□ -2.23
MCF2-210ENST00000536274 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
MCF2-210ENST00000536274 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
MCF2-210ENST00000536274 MT1MQ8N339 61 aa1.04□□□□□ -2.24
MCF2-210ENST00000536274 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
MCF2-210ENST00000536274 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
MCF2-210ENST00000536274 MT4P47944 62 aa0.98□□□□□ -2.25
MCF2-210ENST00000536274 MT1AP04731 61 aa0.97□□□□□ -2.25
MCF2-210ENST00000536274 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
MCF2-210ENST00000536274 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
MCF2-210ENST00000536274 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
MCF2-210ENST00000536274 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 184.8 ms