RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
CDCA3-206ENST00000536241 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
CDCA3-206ENST00000536241 MT1EP04732 61 aa4.22□□□□□ -1.73
CDCA3-206ENST00000536241 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
CDCA3-206ENST00000536241 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
CDCA3-206ENST00000536241 SPRR2EP22531 72 aa4.14□□□□□ -1.75
CDCA3-206ENST00000536241 SPRR2BP35325 72 aa4.14□□□□□ -1.75
CDCA3-206ENST00000536241 SPRR2AP35326 72 aa4.14□□□□□ -1.75
CDCA3-206ENST00000536241 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
CDCA3-206ENST00000536241 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CDCA3-206ENST00000536241 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CDCA3-206ENST00000536241 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CDCA3-206ENST00000536241 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
CDCA3-206ENST00000536241 MT1LQ93083 61 aa4.11□□□□□ -1.75
CDCA3-206ENST00000536241 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
CDCA3-206ENST00000536241 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
CDCA3-206ENST00000536241 MT1GP13640 62 aa4.06□□□□□ -1.76
CDCA3-206ENST00000536241 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CDCA3-206ENST00000536241 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
CDCA3-206ENST00000536241 SPRR2DP22532 72 aa3.99□□□□□ -1.77
CDCA3-206ENST00000536241 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
CDCA3-206ENST00000536241 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
CDCA3-206ENST00000536241 MT1MQ8N339 61 aa3.99□□□□□ -1.77
CDCA3-206ENST00000536241 NEBP20929 6669 aa3.95□□□□□ -1.78
CDCA3-206ENST00000536241 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
CDCA3-206ENST00000536241 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
CDCA3-206ENST00000536241 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
CDCA3-206ENST00000536241 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
CDCA3-206ENST00000536241 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
CDCA3-206ENST00000536241 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
CDCA3-206ENST00000536241 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
CDCA3-206ENST00000536241 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
CDCA3-206ENST00000536241 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
CDCA3-206ENST00000536241 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CDCA3-206ENST00000536241 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
CDCA3-206ENST00000536241 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
CDCA3-206ENST00000536241 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CDCA3-206ENST00000536241 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
CDCA3-206ENST00000536241 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CDCA3-206ENST00000536241 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
CDCA3-206ENST00000536241 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
CDCA3-206ENST00000536241 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CDCA3-206ENST00000536241 MT1AP04731 61 aa3.49□□□□□ -1.85
CDCA3-206ENST00000536241 MT4P47944 62 aa3.48□□□□□ -1.85
CDCA3-206ENST00000536241 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
CDCA3-206ENST00000536241 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
CDCA3-206ENST00000536241 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
CDCA3-206ENST00000536241 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.88
CDCA3-206ENST00000536241 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
CDCA3-206ENST00000536241 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CDCA3-206ENST00000536241 MT3P25713 68 aa3.18□□□□□ -1.9
CDCA3-206ENST00000536241 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
CDCA3-206ENST00000536241 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
CDCA3-206ENST00000536241 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
CDCA3-206ENST00000536241 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
CDCA3-206ENST00000536241 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CDCA3-206ENST00000536241 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
CDCA3-206ENST00000536241 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
CDCA3-206ENST00000536241 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
CDCA3-206ENST00000536241 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CDCA3-206ENST00000536241 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CDCA3-206ENST00000536241 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
CDCA3-206ENST00000536241 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
CDCA3-206ENST00000536241 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
CDCA3-206ENST00000536241 INE1O15225 51 aa2.76□□□□□ -1.97
CDCA3-206ENST00000536241 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.98
CDCA3-206ENST00000536241 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CDCA3-206ENST00000536241 MUC5ACP98088 5654 aa2.58□□□□□ -2
CDCA3-206ENST00000536241 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
CDCA3-206ENST00000536241 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CDCA3-206ENST00000536241 PRM1P04553 51 aa2.36□□□□□ -2.03
CDCA3-206ENST00000536241 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
CDCA3-206ENST00000536241 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
CDCA3-206ENST00000536241 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
CDCA3-206ENST00000536241 PHGR1C9JFL3 82 aa2□□□□□ -2.09
CDCA3-206ENST00000536241 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CDCA3-206ENST00000536241 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CDCA3-206ENST00000536241 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 84.6 ms