RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
CD4-204ENST00000535707 MT1XP80297 61 aa3.68□□□□□ -1.82
CD4-204ENST00000535707 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
CD4-204ENST00000535707 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
CD4-204ENST00000535707 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
CD4-204ENST00000535707 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
CD4-204ENST00000535707 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
CD4-204ENST00000535707 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
CD4-204ENST00000535707 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
CD4-204ENST00000535707 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
CD4-204ENST00000535707 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
CD4-204ENST00000535707 TNP1P09430 55 aa3.47□□□□□ -1.85
CD4-204ENST00000535707 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
CD4-204ENST00000535707 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
CD4-204ENST00000535707 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
CD4-204ENST00000535707 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
CD4-204ENST00000535707 ROMO1P60602 79 aa3.39□□□□□ -1.87
CD4-204ENST00000535707 KMT2DO14686 5537 aa3.36□□□□□ -1.87
CD4-204ENST00000535707 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
CD4-204ENST00000535707 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
CD4-204ENST00000535707 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
CD4-204ENST00000535707 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
CD4-204ENST00000535707 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
CD4-204ENST00000535707 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
CD4-204ENST00000535707 MT1EP04732 61 aa3.25□□□□□ -1.89
CD4-204ENST00000535707 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
CD4-204ENST00000535707 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
CD4-204ENST00000535707 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CD4-204ENST00000535707 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
CD4-204ENST00000535707 SPRR2EP22531 72 aa3.21□□□□□ -1.9
CD4-204ENST00000535707 SPRR2BP35325 72 aa3.21□□□□□ -1.9
CD4-204ENST00000535707 SPRR2AP35326 72 aa3.21□□□□□ -1.9
CD4-204ENST00000535707 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
CD4-204ENST00000535707 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
CD4-204ENST00000535707 MT1GP13640 62 aa3.17□□□□□ -1.9
CD4-204ENST00000535707 MT1LQ93083 61 aa3.15□□□□□ -1.91
CD4-204ENST00000535707 SPRR2DP22532 72 aa3.11□□□□□ -1.91
CD4-204ENST00000535707 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
CD4-204ENST00000535707 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
CD4-204ENST00000535707 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CD4-204ENST00000535707 MT1MQ8N339 61 aa3.08□□□□□ -1.92
CD4-204ENST00000535707 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
CD4-204ENST00000535707 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
CD4-204ENST00000535707 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.93
CD4-204ENST00000535707 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CD4-204ENST00000535707 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CD4-204ENST00000535707 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
CD4-204ENST00000535707 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
CD4-204ENST00000535707 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
CD4-204ENST00000535707 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
CD4-204ENST00000535707 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
CD4-204ENST00000535707 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CD4-204ENST00000535707 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
CD4-204ENST00000535707 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
CD4-204ENST00000535707 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
CD4-204ENST00000535707 INE1O15225 51 aa2.71□□□□□ -1.98
CD4-204ENST00000535707 MT1AP04731 61 aa2.71□□□□□ -1.98
CD4-204ENST00000535707 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
CD4-204ENST00000535707 MT4P47944 62 aa2.66□□□□□ -1.98
CD4-204ENST00000535707 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
CD4-204ENST00000535707 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CD4-204ENST00000535707 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
CD4-204ENST00000535707 MUC5ACP98088 5654 aa2.58□□□□□ -2
CD4-204ENST00000535707 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CD4-204ENST00000535707 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CD4-204ENST00000535707 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
CD4-204ENST00000535707 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
CD4-204ENST00000535707 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CD4-204ENST00000535707 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
CD4-204ENST00000535707 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CD4-204ENST00000535707 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CD4-204ENST00000535707 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CD4-204ENST00000535707 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CD4-204ENST00000535707 PRM1P04553 51 aa1.71□□□□□ -2.14
CD4-204ENST00000535707 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
CD4-204ENST00000535707 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
CD4-204ENST00000535707 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CD4-204ENST00000535707 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms