RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
PDXDC1-205ENST00000535621 MT1LQ93083 61 aa7.44□□□□□ -1.22
PDXDC1-205ENST00000535621 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
PDXDC1-205ENST00000535621 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
PDXDC1-205ENST00000535621 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
PDXDC1-205ENST00000535621 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
PDXDC1-205ENST00000535621 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
PDXDC1-205ENST00000535621 KRTAP19-3Q7Z4W3 81 aa7.27□□□□□ -1.25
PDXDC1-205ENST00000535621 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
PDXDC1-205ENST00000535621 LCE1AQ5T7P2 110 aa7.23□□□□□ -1.25
PDXDC1-205ENST00000535621 MT1GP13640 62 aa7.2□□□□□ -1.26
PDXDC1-205ENST00000535621 SPRR2EP22531 72 aa7.18□□□□□ -1.26
PDXDC1-205ENST00000535621 SPRR2BP35325 72 aa7.18□□□□□ -1.26
PDXDC1-205ENST00000535621 SPRR2AP35326 72 aa7.18□□□□□ -1.26
PDXDC1-205ENST00000535621 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
PDXDC1-205ENST00000535621 MT1MQ8N339 61 aa7.13□□□□□ -1.27
PDXDC1-205ENST00000535621 NEBP20929 6669 aa7.12□□□□□ -1.27
PDXDC1-205ENST00000535621 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
PDXDC1-205ENST00000535621 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
PDXDC1-205ENST00000535621 DSTQ03001 7570 aaKnown RBP6.98□□□□□ -1.29
PDXDC1-205ENST00000535621 SPRR2DP22532 72 aa6.91□□□□□ -1.3
PDXDC1-205ENST00000535621 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
PDXDC1-205ENST00000535621 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
PDXDC1-205ENST00000535621 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
PDXDC1-205ENST00000535621 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
PDXDC1-205ENST00000535621 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
PDXDC1-205ENST00000535621 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
PDXDC1-205ENST00000535621 KRTAP2-1Q9BYU5 128 aa6.52□□□□□ -1.37
PDXDC1-205ENST00000535621 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
PDXDC1-205ENST00000535621 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.39
PDXDC1-205ENST00000535621 INE1O15225 51 aa6.31□□□□□ -1.4
PDXDC1-205ENST00000535621 MT1AP04731 61 aa6.31□□□□□ -1.4
PDXDC1-205ENST00000535621 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
PDXDC1-205ENST00000535621 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
PDXDC1-205ENST00000535621 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
PDXDC1-205ENST00000535621 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
PDXDC1-205ENST00000535621 MT4P47944 62 aa6.08□□□□□ -1.44
PDXDC1-205ENST00000535621 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
PDXDC1-205ENST00000535621 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
PDXDC1-205ENST00000535621 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
PDXDC1-205ENST00000535621 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
PDXDC1-205ENST00000535621 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
PDXDC1-205ENST00000535621 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
PDXDC1-205ENST00000535621 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
PDXDC1-205ENST00000535621 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
PDXDC1-205ENST00000535621 MT3P25713 68 aa5.7□□□□□ -1.5
PDXDC1-205ENST00000535621 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
PDXDC1-205ENST00000535621 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
PDXDC1-205ENST00000535621 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
PDXDC1-205ENST00000535621 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
PDXDC1-205ENST00000535621 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
PDXDC1-205ENST00000535621 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
PDXDC1-205ENST00000535621 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
PDXDC1-205ENST00000535621 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
PDXDC1-205ENST00000535621 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
PDXDC1-205ENST00000535621 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
PDXDC1-205ENST00000535621 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
PDXDC1-205ENST00000535621 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
PDXDC1-205ENST00000535621 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
PDXDC1-205ENST00000535621 PRM1P04553 51 aa4.79□□□□□ -1.64
PDXDC1-205ENST00000535621 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
PDXDC1-205ENST00000535621 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
PDXDC1-205ENST00000535621 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
PDXDC1-205ENST00000535621 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
PDXDC1-205ENST00000535621 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
PDXDC1-205ENST00000535621 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
PDXDC1-205ENST00000535621 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
PDXDC1-205ENST00000535621 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
PDXDC1-205ENST00000535621 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
PDXDC1-205ENST00000535621 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
PDXDC1-205ENST00000535621 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
PDXDC1-205ENST00000535621 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
PDXDC1-205ENST00000535621 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
PDXDC1-205ENST00000535621 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
PDXDC1-205ENST00000535621 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
PDXDC1-205ENST00000535621 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
PDXDC1-205ENST00000535621 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms