RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MT1LQ93083 61 aa6.43□□□□□ -1.38
HTATSF1-204ENST00000535601 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
HTATSF1-204ENST00000535601 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
HTATSF1-204ENST00000535601 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
HTATSF1-204ENST00000535601 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
HTATSF1-204ENST00000535601 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
HTATSF1-204ENST00000535601 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
HTATSF1-204ENST00000535601 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
HTATSF1-204ENST00000535601 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
HTATSF1-204ENST00000535601 MT1MQ8N339 61 aa6.12□□□□□ -1.43
HTATSF1-204ENST00000535601 MT1GP13640 62 aa6.09□□□□□ -1.43
HTATSF1-204ENST00000535601 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
HTATSF1-204ENST00000535601 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
HTATSF1-204ENST00000535601 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
HTATSF1-204ENST00000535601 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
HTATSF1-204ENST00000535601 SPRR2EP22531 72 aa5.83□□□□□ -1.48
HTATSF1-204ENST00000535601 SPRR2BP35325 72 aa5.83□□□□□ -1.48
HTATSF1-204ENST00000535601 SPRR2AP35326 72 aa5.83□□□□□ -1.48
HTATSF1-204ENST00000535601 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
HTATSF1-204ENST00000535601 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
HTATSF1-204ENST00000535601 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
HTATSF1-204ENST00000535601 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
HTATSF1-204ENST00000535601 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
HTATSF1-204ENST00000535601 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
HTATSF1-204ENST00000535601 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
HTATSF1-204ENST00000535601 SPRR2DP22532 72 aa5.58□□□□□ -1.52
HTATSF1-204ENST00000535601 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
HTATSF1-204ENST00000535601 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
HTATSF1-204ENST00000535601 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
HTATSF1-204ENST00000535601 NEBP20929 6669 aa5.42□□□□□ -1.54
HTATSF1-204ENST00000535601 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
HTATSF1-204ENST00000535601 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.55
HTATSF1-204ENST00000535601 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
HTATSF1-204ENST00000535601 MT1AP04731 61 aa5.36□□□□□ -1.55
HTATSF1-204ENST00000535601 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
HTATSF1-204ENST00000535601 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
HTATSF1-204ENST00000535601 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
HTATSF1-204ENST00000535601 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
HTATSF1-204ENST00000535601 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
HTATSF1-204ENST00000535601 MT4P47944 62 aa5.02□□□□□ -1.61
HTATSF1-204ENST00000535601 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
HTATSF1-204ENST00000535601 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
HTATSF1-204ENST00000535601 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
HTATSF1-204ENST00000535601 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
HTATSF1-204ENST00000535601 MT3P25713 68 aa4.83□□□□□ -1.64
HTATSF1-204ENST00000535601 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
HTATSF1-204ENST00000535601 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
HTATSF1-204ENST00000535601 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
HTATSF1-204ENST00000535601 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
HTATSF1-204ENST00000535601 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
HTATSF1-204ENST00000535601 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
HTATSF1-204ENST00000535601 PRM1P04553 51 aa4.68□□□□□ -1.66
HTATSF1-204ENST00000535601 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
HTATSF1-204ENST00000535601 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
HTATSF1-204ENST00000535601 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
HTATSF1-204ENST00000535601 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
HTATSF1-204ENST00000535601 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
HTATSF1-204ENST00000535601 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
HTATSF1-204ENST00000535601 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HTATSF1-204ENST00000535601 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
HTATSF1-204ENST00000535601 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.78
HTATSF1-204ENST00000535601 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
HTATSF1-204ENST00000535601 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
HTATSF1-204ENST00000535601 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
HTATSF1-204ENST00000535601 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
HTATSF1-204ENST00000535601 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
HTATSF1-204ENST00000535601 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
HTATSF1-204ENST00000535601 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
HTATSF1-204ENST00000535601 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
HTATSF1-204ENST00000535601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
HTATSF1-204ENST00000535601 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
HTATSF1-204ENST00000535601 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
HTATSF1-204ENST00000535601 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
HTATSF1-204ENST00000535601 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
HTATSF1-204ENST00000535601 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
HTATSF1-204ENST00000535601 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
HTATSF1-204ENST00000535601 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms