RNA–Protein interactions for RNA: ENST00000535492.5

RAP1B-215, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-215	ENST00000535492	COX7C	P15954	63 aa		8.18	□□□□□ -1.1
RAP1B-215	ENST00000535492		H7BZZ5	65 aa		8.17	□□□□□ -1.1
RAP1B-215	ENST00000535492	KRTAP5-10	Q6L8G5	202 aa		8.16	□□□□□ -1.1
RAP1B-215	ENST00000535492	LOC100996750	A0A140TA64	210 aa		8.14	□□□□□ -1.11
RAP1B-215	ENST00000535492	KRTAP4-7	Q9BYR0	210 aa		8.03	□□□□□ -1.12
RAP1B-215	ENST00000535492	KRTAP12-3	P60328	96 aa		7.95	□□□□□ -1.14
RAP1B-215	ENST00000535492	KRTAP5-3	Q6L8H2	238 aa		7.9	□□□□□ -1.14
RAP1B-215	ENST00000535492	KRTAP5-7	Q6L8G8	165 aa		7.88	□□□□□ -1.15
RAP1B-215	ENST00000535492	KRTAP20-2	Q3LI61	65 aa		7.85	□□□□□ -1.15
RAP1B-215	ENST00000535492	PRR15L	Q9BU68	103 aa		7.81	□□□□□ -1.16
RAP1B-215	ENST00000535492	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.8	□□□□□ -1.16
RAP1B-215	ENST00000535492	SPRR5	A0A1B0GTR4	108 aa		7.74	□□□□□ -1.17
RAP1B-215	ENST00000535492	ANAPC13	Q9BS18	74 aa		7.7	□□□□□ -1.18
RAP1B-215	ENST00000535492	KRTAP12-4	P60329	112 aa		7.68	□□□□□ -1.18
RAP1B-215	ENST00000535492	LINC01558	Q9Y6Z2	57 aa		7.64	□□□□□ -1.19
RAP1B-215	ENST00000535492	ATP5E	P56381	51 aa	Predicted RBP	7.58	□□□□□ -1.2
RAP1B-215	ENST00000535492	CCDC179	H3BU77	68 aa		7.57	□□□□□ -1.2
RAP1B-215	ENST00000535492	UQCR11	O14957	56 aa		7.53	□□□□□ -1.2
RAP1B-215	ENST00000535492	KRTAP25-1	Q3LHN0	102 aa		7.53	□□□□□ -1.2
RAP1B-215	ENST00000535492	SYNE1	Q8NF91	8797 aa	Known RBP	7.52	□□□□□ -1.21
RAP1B-215	ENST00000535492	KRTAP19-4	Q3LI73	84 aa		7.39	□□□□□ -1.23
RAP1B-215	ENST00000535492	MIR22HG	Q0VDD5	57 aa		7.35	□□□□□ -1.23
RAP1B-215	ENST00000535492	KRTAP15-1	Q3LI76	137 aa		7.3	□□□□□ -1.24
RAP1B-215	ENST00000535492		K7ERS5	55 aa		7.27	□□□□□ -1.25
RAP1B-215	ENST00000535492	LCE3C	Q5T5A8	94 aa		7.27	□□□□□ -1.25
RAP1B-215	ENST00000535492	TMEM258	P61165	79 aa		7.24	□□□□□ -1.25
RAP1B-215	ENST00000535492	KRTAP4-11	Q9BYQ6	195 aa		7.24	□□□□□ -1.25
RAP1B-215	ENST00000535492	KRTAP4-12	Q9BQ66	201 aa		7.21	□□□□□ -1.26
RAP1B-215	ENST00000535492	KRTAP23-1	A1A580	65 aa		7.19	□□□□□ -1.26
RAP1B-215	ENST00000535492	KRTAP5-2	Q701N4	177 aa		7.19	□□□□□ -1.26
RAP1B-215	ENST00000535492	MT1A	P04731	61 aa		7.16	□□□□□ -1.26
RAP1B-215	ENST00000535492	KRTAP6-1	Q3LI64	71 aa		7.16	□□□□□ -1.26
RAP1B-215	ENST00000535492	PSPHP1	O15172	72 aa		7.03	□□□□□ -1.28
RAP1B-215	ENST00000535492	KRTAP5-8	O75690	187 aa		7.01	□□□□□ -1.29
RAP1B-215	ENST00000535492	KRTAP9-4	Q9BYQ2	154 aa		6.95	□□□□□ -1.3
RAP1B-215	ENST00000535492		H3BS24	57 aa		6.93	□□□□□ -1.3
RAP1B-215	ENST00000535492	KRTAP9-9	Q9BYP9	154 aa		6.93	□□□□□ -1.3
RAP1B-215	ENST00000535492		V9GYY9	64 aa		6.92	□□□□□ -1.3
RAP1B-215	ENST00000535492	KRTAP6-2	Q3LI66	62 aa		6.91	□□□□□ -1.3
RAP1B-215	ENST00000535492	KRTAP9-6	A8MVA2	160 aa		6.89	□□□□□ -1.31
RAP1B-215	ENST00000535492	MUC5AC	P98088	5654 aa		6.85	□□□□□ -1.31
RAP1B-215	ENST00000535492		Q1T7F1	81 aa		6.85	□□□□□ -1.31
RAP1B-215	ENST00000535492	CDC42SE1	Q9NRR8	79 aa		6.85	□□□□□ -1.31
RAP1B-215	ENST00000535492	AHNAK	Q09666	5890 aa	Known RBP	6.83	□□□□□ -1.32
RAP1B-215	ENST00000535492	OBSCN	Q5VST9	7968 aa		6.8	□□□□□ -1.32
RAP1B-215	ENST00000535492	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.79	□□□□□ -1.32
RAP1B-215	ENST00000535492	RPS28	P62857	69 aa	Known RBP	6.78	□□□□□ -1.32
RAP1B-215	ENST00000535492		A6NED7	52 aa		6.75	□□□□□ -1.33
RAP1B-215	ENST00000535492	ROMO1	P60602	79 aa		6.7	□□□□□ -1.34
RAP1B-215	ENST00000535492	MT3	P25713	68 aa		6.55	□□□□□ -1.36
RAP1B-215	ENST00000535492	KRTAP5-1	Q6L8H4	278 aa		6.51	□□□□□ -1.37
RAP1B-215	ENST00000535492	KRTAP4-2	Q9BYR5	136 aa		6.34	□□□□□ -1.39
RAP1B-215	ENST00000535492	LCE1E	Q5T753	118 aa		6.08	□□□□□ -1.44
RAP1B-215	ENST00000535492	LCE1B	Q5T7P3	118 aa		5.82	□□□□□ -1.48
RAP1B-215	ENST00000535492	LCE1C	Q5T751	118 aa		5.65	□□□□□ -1.5
RAP1B-215	ENST00000535492	PCP4	P48539	62 aa		5.6	□□□□□ -1.51
RAP1B-215	ENST00000535492	BRK1	Q8WUW1	75 aa		5.34	□□□□□ -1.55
RAP1B-215	ENST00000535492	SVIP	Q8NHG7	77 aa		5.22	□□□□□ -1.57
RAP1B-215	ENST00000535492	KRTAP5-11	Q6L8G4	156 aa		5.17	□□□□□ -1.58
RAP1B-215	ENST00000535492	LCE3D	Q9BYE3	92 aa		5.17	□□□□□ -1.58
RAP1B-215	ENST00000535492	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.09	□□□□□ -1.59
RAP1B-215	ENST00000535492	LCE1F	Q5T754	118 aa		5.08	□□□□□ -1.6
RAP1B-215	ENST00000535492	PMAIP1	Q13794	54 aa		4.96	□□□□□ -1.62
RAP1B-215	ENST00000535492	PRAC1	Q96KF2	57 aa		4.95	□□□□□ -1.62
RAP1B-215	ENST00000535492	LCE3E	Q5T5B0	92 aa		4.8	□□□□□ -1.64
RAP1B-215	ENST00000535492	PHGR1	C9JFL3	82 aa		4.79	□□□□□ -1.64
RAP1B-215	ENST00000535492	KRTAP21-2	Q3LI59	83 aa		4.71	□□□□□ -1.66
RAP1B-215	ENST00000535492		A0A0A0MQY5	61 aa		4.58	□□□□□ -1.68
RAP1B-215	ENST00000535492	KRTAP4-4	Q9BYR3	166 aa		4.41	□□□□□ -1.7
RAP1B-215	ENST00000535492	LUZP6	Q538Z0	58 aa		4.22	□□□□□ -1.73
RAP1B-215	ENST00000535492	MUC19	Q7Z5P9	8384 aa		4.22	□□□□□ -1.73
RAP1B-215	ENST00000535492	PRO0628	Q9UI54	55 aa		4.14	□□□□□ -1.75
RAP1B-215	ENST00000535492	KTN1-AS1	Q86SY8	53 aa		4.11	□□□□□ -1.75
RAP1B-215	ENST00000535492	KRTAP21-1	Q3LI58	79 aa		3.62	□□□□□ -1.83
RAP1B-215	ENST00000535492	NDUFAF8	A1L188	74 aa		3.58	□□□□□ -1.84
RAP1B-215	ENST00000535492	PRM1	P04553	51 aa		3.43	□□□□□ -1.86
RAP1B-215	ENST00000535492	MUC16	Q8WXI7	14507 aa		3.03	□□□□□ -1.92
RAP1B-215	ENST00000535492	INE1	O15225	51 aa		2.16	□□□□□ -2.06

Retrieved 78 of 20,778 RNA–protein pairs in 62.3 ms