RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
DDB1-204ENST00000535147 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
DDB1-204ENST00000535147 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
DDB1-204ENST00000535147 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
DDB1-204ENST00000535147 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
DDB1-204ENST00000535147 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
DDB1-204ENST00000535147 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
DDB1-204ENST00000535147 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
DDB1-204ENST00000535147 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
DDB1-204ENST00000535147 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
DDB1-204ENST00000535147 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
DDB1-204ENST00000535147 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
DDB1-204ENST00000535147 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
DDB1-204ENST00000535147 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
DDB1-204ENST00000535147 MT1LQ93083 61 aa3.51□□□□□ -1.85
DDB1-204ENST00000535147 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
DDB1-204ENST00000535147 MT1EP04732 61 aa3.5□□□□□ -1.85
DDB1-204ENST00000535147 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
DDB1-204ENST00000535147 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
DDB1-204ENST00000535147 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.85
DDB1-204ENST00000535147 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
DDB1-204ENST00000535147 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
DDB1-204ENST00000535147 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
DDB1-204ENST00000535147 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
DDB1-204ENST00000535147 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
DDB1-204ENST00000535147 MT1GP13640 62 aa3.34□□□□□ -1.88
DDB1-204ENST00000535147 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
DDB1-204ENST00000535147 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
DDB1-204ENST00000535147 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
DDB1-204ENST00000535147 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
DDB1-204ENST00000535147 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
DDB1-204ENST00000535147 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
DDB1-204ENST00000535147 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.89
DDB1-204ENST00000535147 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
DDB1-204ENST00000535147 MT1MQ8N339 61 aa3.27□□□□□ -1.89
DDB1-204ENST00000535147 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
DDB1-204ENST00000535147 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
DDB1-204ENST00000535147 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
DDB1-204ENST00000535147 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
DDB1-204ENST00000535147 NEBP20929 6669 aa3.12□□□□□ -1.91
DDB1-204ENST00000535147 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
DDB1-204ENST00000535147 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
DDB1-204ENST00000535147 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
DDB1-204ENST00000535147 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
DDB1-204ENST00000535147 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
DDB1-204ENST00000535147 MT3P25713 68 aa3.01□□□□□ -1.93
DDB1-204ENST00000535147 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
DDB1-204ENST00000535147 MDN1Q9NU22 5596 aa2.96□□□□□ -1.93
DDB1-204ENST00000535147 MT1AP04731 61 aa2.94□□□□□ -1.94
DDB1-204ENST00000535147 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
DDB1-204ENST00000535147 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
DDB1-204ENST00000535147 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
DDB1-204ENST00000535147 PRM1P04553 51 aa2.83□□□□□ -1.96
DDB1-204ENST00000535147 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
DDB1-204ENST00000535147 SPRR2EP22531 72 aa2.79□□□□□ -1.96
DDB1-204ENST00000535147 SPRR2BP35325 72 aa2.79□□□□□ -1.96
DDB1-204ENST00000535147 SPRR2AP35326 72 aa2.79□□□□□ -1.96
DDB1-204ENST00000535147 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
DDB1-204ENST00000535147 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
DDB1-204ENST00000535147 SPRR2DP22532 72 aa2.66□□□□□ -1.98
DDB1-204ENST00000535147 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
DDB1-204ENST00000535147 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
DDB1-204ENST00000535147 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
DDB1-204ENST00000535147 MT4P47944 62 aa2.4□□□□□ -2.03
DDB1-204ENST00000535147 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
DDB1-204ENST00000535147 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
DDB1-204ENST00000535147 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
DDB1-204ENST00000535147 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
DDB1-204ENST00000535147 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
DDB1-204ENST00000535147 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
DDB1-204ENST00000535147 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
DDB1-204ENST00000535147 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
DDB1-204ENST00000535147 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.09
DDB1-204ENST00000535147 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
DDB1-204ENST00000535147 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
DDB1-204ENST00000535147 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
DDB1-204ENST00000535147 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
DDB1-204ENST00000535147 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 239 ms