RNA–Protein interactions for RNA: ENST00000534900.5

PTPN6-205, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 4

Gene PTPN6, Length 538 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-205	ENST00000534900	RPS28	P62857	69 aa	Known RBP	5.18	□□□□□ -1.58
PTPN6-205	ENST00000534900		A6NED7	52 aa		5.14	□□□□□ -1.59
PTPN6-205	ENST00000534900	MT1G	P13640	62 aa		5.14	□□□□□ -1.59
PTPN6-205	ENST00000534900	DST	Q03001	7570 aa	Known RBP	5.13	□□□□□ -1.59
PTPN6-205	ENST00000534900	MT1L	Q93083	61 aa		5.11	□□□□□ -1.59
PTPN6-205	ENST00000534900	KRTAP25-1	Q3LHN0	102 aa		5.09	□□□□□ -1.59
PTPN6-205	ENST00000534900	PP632	Q6XCG6	107 aa		5.08	□□□□□ -1.6
PTPN6-205	ENST00000534900	KRTAP12-3	P60328	96 aa		5.05	□□□□□ -1.6
PTPN6-205	ENST00000534900	MT1M	Q8N339	61 aa		5.05	□□□□□ -1.6
PTPN6-205	ENST00000534900	KRTAP4-3	Q9BYR4	195 aa		4.97	□□□□□ -1.61
PTPN6-205	ENST00000534900	CDC42SE1	Q9NRR8	79 aa		4.93	□□□□□ -1.62
PTPN6-205	ENST00000534900	KRTAP4-7	Q9BYR0	210 aa		4.91	□□□□□ -1.62
PTPN6-205	ENST00000534900	KRTAP23-1	A1A580	65 aa		4.89	□□□□□ -1.63
PTPN6-205	ENST00000534900	ROMO1	P60602	79 aa		4.88	□□□□□ -1.63
PTPN6-205	ENST00000534900	KRTAP4-9	Q9BYQ8	210 aa		4.87	□□□□□ -1.63
PTPN6-205	ENST00000534900	LCE4A	Q5TA78	99 aa		4.78	□□□□□ -1.64
PTPN6-205	ENST00000534900	KRTAP15-1	Q3LI76	137 aa		4.77	□□□□□ -1.65
PTPN6-205	ENST00000534900	MT4	P47944	62 aa		4.74	□□□□□ -1.65
PTPN6-205	ENST00000534900	KRTAP19-4	Q3LI73	84 aa		4.74	□□□□□ -1.65
PTPN6-205	ENST00000534900	LCE1D	Q5T752	114 aa		4.74	□□□□□ -1.65
PTPN6-205	ENST00000534900	HMCN1	Q96RW7	5635 aa		4.71	□□□□□ -1.66
PTPN6-205	ENST00000534900	KRTAP5-4	Q6L8H1	288 aa		4.71	□□□□□ -1.66
PTPN6-205	ENST00000534900	LCE3C	Q5T5A8	94 aa		4.67	□□□□□ -1.66
PTPN6-205	ENST00000534900	GPR98	Q8WXG9	6306 aa		4.64	□□□□□ -1.67
PTPN6-205	ENST00000534900	LOC100996750	A0A140TA64	210 aa		4.64	□□□□□ -1.67
PTPN6-205	ENST00000534900	KRTAP4-6	Q9BYQ5	205 aa		4.62	□□□□□ -1.67
PTPN6-205	ENST00000534900	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN6-205	ENST00000534900	BRK1	Q8WUW1	75 aa		4.57	□□□□□ -1.68
PTPN6-205	ENST00000534900	SYNE1	Q8NF91	8797 aa	Known RBP	4.47	□□□□□ -1.69
PTPN6-205	ENST00000534900	KRTAP12-4	P60329	112 aa		4.47	□□□□□ -1.69
PTPN6-205	ENST00000534900	AHNAK2	Q8IVF2	5795 aa		4.46	□□□□□ -1.7
PTPN6-205	ENST00000534900	KRTAP20-2	Q3LI61	65 aa		4.45	□□□□□ -1.7
PTPN6-205	ENST00000534900	SPRR5	A0A1B0GTR4	108 aa		4.44	□□□□□ -1.7
PTPN6-205	ENST00000534900	KRTAP9-6	A8MVA2	160 aa		4.4	□□□□□ -1.71
PTPN6-205	ENST00000534900	MT1A	P04731	61 aa		4.34	□□□□□ -1.71
PTPN6-205	ENST00000534900	PMAIP1	Q13794	54 aa		4.32	□□□□□ -1.72
PTPN6-205	ENST00000534900	KRTAP6-1	Q3LI64	71 aa		4.32	□□□□□ -1.72
PTPN6-205	ENST00000534900	KRTAP5-10	Q6L8G5	202 aa		4.31	□□□□□ -1.72
PTPN6-205	ENST00000534900	KRTAP5-3	Q6L8H2	238 aa		4.31	□□□□□ -1.72
PTPN6-205	ENST00000534900	PRO0628	Q9UI54	55 aa		4.25	□□□□□ -1.73
PTPN6-205	ENST00000534900	KRTAP9-4	Q9BYQ2	154 aa		4.21	□□□□□ -1.74
PTPN6-205	ENST00000534900	KRTAP5-2	Q701N4	177 aa		4.15	□□□□□ -1.75
PTPN6-205	ENST00000534900	PRAC1	Q96KF2	57 aa		4.13	□□□□□ -1.75
PTPN6-205	ENST00000534900	KRTAP5-7	Q6L8G8	165 aa		4.12	□□□□□ -1.75
PTPN6-205	ENST00000534900	KRTAP6-2	Q3LI66	62 aa		4.11	□□□□□ -1.75
PTPN6-205	ENST00000534900	KRTAP4-11	Q9BYQ6	195 aa		4.02	□□□□□ -1.77
PTPN6-205	ENST00000534900	MT3	P25713	68 aa		3.98	□□□□□ -1.77
PTPN6-205	ENST00000534900	KTN1-AS1	Q86SY8	53 aa		3.97	□□□□□ -1.77
PTPN6-205	ENST00000534900	OBSCN	Q5VST9	7968 aa		3.91	□□□□□ -1.78
PTPN6-205	ENST00000534900	KRTAP5-8	O75690	187 aa		3.89	□□□□□ -1.79
PTPN6-205	ENST00000534900	SVIP	Q8NHG7	77 aa		3.8	□□□□□ -1.8
PTPN6-205	ENST00000534900	MUC5AC	P98088	5654 aa		3.71	□□□□□ -1.81
PTPN6-205	ENST00000534900	KRTAP5-1	Q6L8H4	278 aa		3.7	□□□□□ -1.82
PTPN6-205	ENST00000534900	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.68	□□□□□ -1.82
PTPN6-205	ENST00000534900	AHNAK	Q09666	5890 aa	Known RBP	3.67	□□□□□ -1.82
PTPN6-205	ENST00000534900	KRTAP9-9	Q9BYP9	154 aa		3.66	□□□□□ -1.82
PTPN6-205	ENST00000534900	LCE1E	Q5T753	118 aa		3.6	□□□□□ -1.83
PTPN6-205	ENST00000534900	LUZP6	Q538Z0	58 aa		3.45	□□□□□ -1.86
PTPN6-205	ENST00000534900	LCE1B	Q5T7P3	118 aa		3.42	□□□□□ -1.86
PTPN6-205	ENST00000534900	LCE3D	Q9BYE3	92 aa		3.4	□□□□□ -1.87
PTPN6-205	ENST00000534900	KRTAP4-2	Q9BYR5	136 aa		3.39	□□□□□ -1.87
PTPN6-205	ENST00000534900	LCE1C	Q5T751	118 aa		3.34	□□□□□ -1.87
PTPN6-205	ENST00000534900	LCE3E	Q5T5B0	92 aa		3.22	□□□□□ -1.89
PTPN6-205	ENST00000534900	NDUFAF8	A1L188	74 aa		3.08	□□□□□ -1.92
PTPN6-205	ENST00000534900	KRTAP4-12	Q9BQ66	201 aa		3.06	□□□□□ -1.92
PTPN6-205	ENST00000534900	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.05	□□□□□ -1.92
PTPN6-205	ENST00000534900	KRTAP5-11	Q6L8G4	156 aa		2.99	□□□□□ -1.93
PTPN6-205	ENST00000534900	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
PTPN6-205	ENST00000534900	KRTAP21-2	Q3LI59	83 aa		2.84	□□□□□ -1.95
PTPN6-205	ENST00000534900		A0A0A0MQY5	61 aa		2.7	□□□□□ -1.98
PTPN6-205	ENST00000534900	KRTAP4-4	Q9BYR3	166 aa		2.62	□□□□□ -1.99
PTPN6-205	ENST00000534900	PHGR1	C9JFL3	82 aa		2.59	□□□□□ -1.99
PTPN6-205	ENST00000534900		H3BS24	57 aa		2.56	□□□□□ -2
PTPN6-205	ENST00000534900	INE1	O15225	51 aa		2.53	□□□□□ -2
PTPN6-205	ENST00000534900	PRM1	P04553	51 aa		2.51	□□□□□ -2.01
PTPN6-205	ENST00000534900	MUC19	Q7Z5P9	8384 aa		2.39	□□□□□ -2.03
PTPN6-205	ENST00000534900	KRTAP21-1	Q3LI58	79 aa		1.89	□□□□□ -2.11
PTPN6-205	ENST00000534900	MUC16	Q8WXI7	14507 aa		1.65	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms