RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
CLSTN3-203ENST00000534830 A0A1B0GU69 56 aa3.58□□□□□ -1.84
CLSTN3-203ENST00000534830 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CLSTN3-203ENST00000534830 MT1MQ8N339 61 aa3.58□□□□□ -1.84
CLSTN3-203ENST00000534830 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CLSTN3-203ENST00000534830 MT1LQ93083 61 aa3.57□□□□□ -1.84
CLSTN3-203ENST00000534830 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
CLSTN3-203ENST00000534830 A8MU10 97 aa3.54□□□□□ -1.84
CLSTN3-203ENST00000534830 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CLSTN3-203ENST00000534830 RPS28P62857 69 aaKnown RBP3.52□□□□□ -1.85
CLSTN3-203ENST00000534830 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
CLSTN3-203ENST00000534830 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
CLSTN3-203ENST00000534830 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
CLSTN3-203ENST00000534830 Q1T7F1 81 aa3.51□□□□□ -1.85
CLSTN3-203ENST00000534830 TNP1P09430 55 aa3.49□□□□□ -1.85
CLSTN3-203ENST00000534830 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CLSTN3-203ENST00000534830 PSPHP1O15172 72 aa3.48□□□□□ -1.85
CLSTN3-203ENST00000534830 V9GYY9 64 aa3.46□□□□□ -1.86
CLSTN3-203ENST00000534830 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
CLSTN3-203ENST00000534830 UQCR11O14957 56 aa3.41□□□□□ -1.86
CLSTN3-203ENST00000534830 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
CLSTN3-203ENST00000534830 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
CLSTN3-203ENST00000534830 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CLSTN3-203ENST00000534830 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
CLSTN3-203ENST00000534830 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
CLSTN3-203ENST00000534830 A6NED7 52 aa3.34□□□□□ -1.87
CLSTN3-203ENST00000534830 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
CLSTN3-203ENST00000534830 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
CLSTN3-203ENST00000534830 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
CLSTN3-203ENST00000534830 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
CLSTN3-203ENST00000534830 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
CLSTN3-203ENST00000534830 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
CLSTN3-203ENST00000534830 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
CLSTN3-203ENST00000534830 K7ERS5 55 aa3.2□□□□□ -1.9
CLSTN3-203ENST00000534830 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
CLSTN3-203ENST00000534830 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
CLSTN3-203ENST00000534830 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
CLSTN3-203ENST00000534830 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
CLSTN3-203ENST00000534830 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
CLSTN3-203ENST00000534830 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CLSTN3-203ENST00000534830 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CLSTN3-203ENST00000534830 ROMO1P60602 79 aa3.09□□□□□ -1.91
CLSTN3-203ENST00000534830 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
CLSTN3-203ENST00000534830 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CLSTN3-203ENST00000534830 MT1AP04731 61 aa3.03□□□□□ -1.92
CLSTN3-203ENST00000534830 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
CLSTN3-203ENST00000534830 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
CLSTN3-203ENST00000534830 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
CLSTN3-203ENST00000534830 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
CLSTN3-203ENST00000534830 PMAIP1Q13794 54 aa2.95□□□□□ -1.94
CLSTN3-203ENST00000534830 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
CLSTN3-203ENST00000534830 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
CLSTN3-203ENST00000534830 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
CLSTN3-203ENST00000534830 MT3P25713 68 aa2.77□□□□□ -1.97
CLSTN3-203ENST00000534830 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
CLSTN3-203ENST00000534830 SVIPQ8NHG7 77 aa2.62□□□□□ -1.99
CLSTN3-203ENST00000534830 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
CLSTN3-203ENST00000534830 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
CLSTN3-203ENST00000534830 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
CLSTN3-203ENST00000534830 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CLSTN3-203ENST00000534830 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
CLSTN3-203ENST00000534830 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CLSTN3-203ENST00000534830 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
CLSTN3-203ENST00000534830 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CLSTN3-203ENST00000534830 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
CLSTN3-203ENST00000534830 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
CLSTN3-203ENST00000534830 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
CLSTN3-203ENST00000534830 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
CLSTN3-203ENST00000534830 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
CLSTN3-203ENST00000534830 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
CLSTN3-203ENST00000534830 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
CLSTN3-203ENST00000534830 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
CLSTN3-203ENST00000534830 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
CLSTN3-203ENST00000534830 A0A0A0MQY5 61 aa1.72□□□□□ -2.13
CLSTN3-203ENST00000534830 H3BS24 57 aa1.7□□□□□ -2.14
CLSTN3-203ENST00000534830 INE1O15225 51 aa1.69□□□□□ -2.14
CLSTN3-203ENST00000534830 PRM1P04553 51 aa1.63□□□□□ -2.15
CLSTN3-203ENST00000534830 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms