RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
SF3B2-216ENST00000534765 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
SF3B2-216ENST00000534765 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
SF3B2-216ENST00000534765 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
SF3B2-216ENST00000534765 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
SF3B2-216ENST00000534765 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
SF3B2-216ENST00000534765 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
SF3B2-216ENST00000534765 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
SF3B2-216ENST00000534765 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
SF3B2-216ENST00000534765 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
SF3B2-216ENST00000534765 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
SF3B2-216ENST00000534765 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SF3B2-216ENST00000534765 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
SF3B2-216ENST00000534765 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
SF3B2-216ENST00000534765 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
SF3B2-216ENST00000534765 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
SF3B2-216ENST00000534765 MT1EP04732 61 aa3.14□□□□□ -1.91
SF3B2-216ENST00000534765 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SF3B2-216ENST00000534765 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
SF3B2-216ENST00000534765 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
SF3B2-216ENST00000534765 MT1LQ93083 61 aa3.09□□□□□ -1.91
SF3B2-216ENST00000534765 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
SF3B2-216ENST00000534765 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
SF3B2-216ENST00000534765 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
SF3B2-216ENST00000534765 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
SF3B2-216ENST00000534765 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
SF3B2-216ENST00000534765 MT1MQ8N339 61 aa2.95□□□□□ -1.94
SF3B2-216ENST00000534765 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
SF3B2-216ENST00000534765 MT1GP13640 62 aa2.93□□□□□ -1.94
SF3B2-216ENST00000534765 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
SF3B2-216ENST00000534765 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
SF3B2-216ENST00000534765 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
SF3B2-216ENST00000534765 PRM1P04553 51 aa2.84□□□□□ -1.95
SF3B2-216ENST00000534765 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.96
SF3B2-216ENST00000534765 SPRR2EP22531 72 aa2.79□□□□□ -1.96
SF3B2-216ENST00000534765 SPRR2BP35325 72 aa2.79□□□□□ -1.96
SF3B2-216ENST00000534765 SPRR2AP35326 72 aa2.79□□□□□ -1.96
SF3B2-216ENST00000534765 NEBP20929 6669 aa2.75□□□□□ -1.97
SF3B2-216ENST00000534765 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
SF3B2-216ENST00000534765 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
SF3B2-216ENST00000534765 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
SF3B2-216ENST00000534765 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
SF3B2-216ENST00000534765 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
SF3B2-216ENST00000534765 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
SF3B2-216ENST00000534765 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SF3B2-216ENST00000534765 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SF3B2-216ENST00000534765 SPRR2DP22532 72 aa2.66□□□□□ -1.98
SF3B2-216ENST00000534765 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SF3B2-216ENST00000534765 MT1AP04731 61 aa2.53□□□□□ -2
SF3B2-216ENST00000534765 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
SF3B2-216ENST00000534765 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SF3B2-216ENST00000534765 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
SF3B2-216ENST00000534765 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
SF3B2-216ENST00000534765 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
SF3B2-216ENST00000534765 MT4P47944 62 aa2.43□□□□□ -2.02
SF3B2-216ENST00000534765 MT3P25713 68 aa2.43□□□□□ -2.02
SF3B2-216ENST00000534765 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
SF3B2-216ENST00000534765 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
SF3B2-216ENST00000534765 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
SF3B2-216ENST00000534765 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
SF3B2-216ENST00000534765 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
SF3B2-216ENST00000534765 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
SF3B2-216ENST00000534765 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
SF3B2-216ENST00000534765 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
SF3B2-216ENST00000534765 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
SF3B2-216ENST00000534765 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
SF3B2-216ENST00000534765 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
SF3B2-216ENST00000534765 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
SF3B2-216ENST00000534765 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
SF3B2-216ENST00000534765 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
SF3B2-216ENST00000534765 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
SF3B2-216ENST00000534765 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
SF3B2-216ENST00000534765 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
SF3B2-216ENST00000534765 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
SF3B2-216ENST00000534765 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
SF3B2-216ENST00000534765 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SF3B2-216ENST00000534765 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SF3B2-216ENST00000534765 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms